Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rfx1P48377 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rfx1P48377 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx1P48377 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx1P48377 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC13.35□□□□□ -0.27
Rfx1P48377 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rfx1P48377 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx1P48377 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rfx1P48377 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx1P48377 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx1P48377 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx1P48377 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx1P48377 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx1P48377 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx1P48377 Gm13910-201ENSMUST00000121752 1428 ntBASIC13.34□□□□□ -0.27
Rfx1P48377 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13.34□□□□□ -0.27
Rfx1P48377 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx1P48377 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.34□□□□□ -0.27
Rfx1P48377 Gm11663-201ENSMUST00000117888 290 ntBASIC13.34□□□□□ -0.27
Rfx1P48377 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.34□□□□□ -0.27
Rfx1P48377 Gm8876-201ENSMUST00000120768 1122 ntBASIC13.34□□□□□ -0.27
Rfx1P48377 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.34□□□□□ -0.27
Rfx1P48377 Gm15276-201ENSMUST00000145953 498 ntBASIC13.34□□□□□ -0.27
Rfx1P48377 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx1P48377 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx1P48377 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.34□□□□□ -0.27
Rfx1P48377 Gm37666-201ENSMUST00000194110 866 ntBASIC13.34□□□□□ -0.27
Rfx1P48377 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.34□□□□□ -0.27
Rfx1P48377 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.34□□□□□ -0.27
Rfx1P48377 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
Rfx1P48377 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.34□□□□□ -0.27
Rfx1P48377 Gm270-201ENSMUST00000223010 976 ntBASIC13.34□□□□□ -0.27
Rfx1P48377 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx1P48377 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx1P48377 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.34□□□□□ -0.27
Rfx1P48377 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx1P48377 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx1P48377 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx1P48377 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx1P48377 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx1P48377 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx1P48377 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx1P48377 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rfx1P48377 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx1P48377 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rfx1P48377 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx1P48377 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx1P48377 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx1P48377 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC13.34□□□□□ -0.27
Rfx1P48377 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC13.34□□□□□ -0.27
Rfx1P48377 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx1P48377 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx1P48377 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx1P48377 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Rfx1P48377 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx1P48377 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx1P48377 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx1P48377 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx1P48377 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rfx1P48377 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx1P48377 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx1P48377 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Rfx1P48377 Gm13183-201ENSMUST00000118615 789 ntBASIC13.33□□□□□ -0.28
Rfx1P48377 Gm15711-201ENSMUST00000118889 535 ntBASIC13.33□□□□□ -0.28
Rfx1P48377 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC13.33□□□□□ -0.28
Rfx1P48377 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx1P48377 Gm5342-201ENSMUST00000181982 1003 ntBASIC13.33□□□□□ -0.28
Rfx1P48377 Gm5714-201ENSMUST00000197343 566 ntBASIC13.33□□□□□ -0.28
Rfx1P48377 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.33□□□□□ -0.28
Rfx1P48377 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx1P48377 Gm45575-201ENSMUST00000210283 548 ntBASIC13.33□□□□□ -0.28
Rfx1P48377 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.33□□□□□ -0.28
Rfx1P48377 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx1P48377 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx1P48377 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx1P48377 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx1P48377 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx1P48377 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx1P48377 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx1P48377 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx1P48377 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx1P48377 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx1P48377 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx1P48377 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx1P48377 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx1P48377 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx1P48377 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx1P48377 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx1P48377 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC13.32□□□□□ -0.28
Rfx1P48377 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx1P48377 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rfx1P48377 Gm23596-201ENSMUST00000104304 132 ntBASIC13.32□□□□□ -0.28
Rfx1P48377 Snord17-201ENSMUST00000104526 238 ntBASIC13.32□□□□□ -0.28
Rfx1P48377 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rfx1P48377 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx1P48377 Gm10807-201ENSMUST00000177134 795 ntBASIC13.32□□□□□ -0.28
Rfx1P48377 Mir7677-201ENSMUST00000184226 67 ntBASIC13.32□□□□□ -0.28
Rfx1P48377 Gm44262-201ENSMUST00000204969 372 ntBASIC13.32□□□□□ -0.28
Rfx1P48377 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.32□□□□□ -0.28
Rfx1P48377 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms