Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC10.67□□□□□ -0.7
Cdx2P43241 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC10.67□□□□□ -0.7
Cdx2P43241 AC158986.2-201ENSMUST00000227487 618 ntBASIC10.67□□□□□ -0.7
Cdx2P43241 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC10.67□□□□□ -0.7
Cdx2P43241 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Cdx2P43241 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Cdx2P43241 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx2P43241 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx2P43241 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx2P43241 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx2P43241 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx2P43241 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx2P43241 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Cdx2P43241 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC10.67□□□□□ -0.7
Cdx2P43241 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx2P43241 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx2P43241 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Cdx2P43241 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx2P43241 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx2P43241 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx2P43241 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Cdx2P43241 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx2P43241 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx2P43241 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx2P43241 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx2P43241 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.66□□□□□ -0.7
Cdx2P43241 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.66□□□□□ -0.7
Cdx2P43241 Gm42970-201ENSMUST00000196407 1352 ntBASIC10.66□□□□□ -0.7
Cdx2P43241 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx2P43241 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.66□□□□□ -0.7
Cdx2P43241 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx2P43241 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx2P43241 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx2P43241 AC125108.1-201ENSMUST00000218986 2330 ntBASIC10.66□□□□□ -0.7
Cdx2P43241 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx2P43241 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx2P43241 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx2P43241 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Cdx2P43241 Gm5395-201ENSMUST00000121650 915 ntBASIC10.66□□□□□ -0.7
Cdx2P43241 Mup-ps29-201ENSMUST00000122281 202 ntBASIC10.66□□□□□ -0.7
Cdx2P43241 Gm22344-201ENSMUST00000122642 278 ntBASIC10.66□□□□□ -0.7
Cdx2P43241 Gm16547-201ENSMUST00000159474 293 ntBASIC10.66□□□□□ -0.7
Cdx2P43241 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC10.66□□□□□ -0.7
Cdx2P43241 Gm7880-201ENSMUST00000203748 871 ntBASIC10.66□□□□□ -0.7
Cdx2P43241 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Cdx2P43241 Gm4930-201ENSMUST00000219926 1087 ntBASIC10.66□□□□□ -0.7
Cdx2P43241 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC10.66□□□□□ -0.7
Cdx2P43241 AC156790.2-201ENSMUST00000227115 568 ntBASIC10.66□□□□□ -0.7
Cdx2P43241 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx2P43241 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Cdx2P43241 Gm10580-201ENSMUST00000097985 396 ntBASIC10.66□□□□□ -0.7
Cdx2P43241 Gm10582-201ENSMUST00000097987 396 ntBASIC10.66□□□□□ -0.7
Cdx2P43241 Gm10583-201ENSMUST00000097988 396 ntBASIC10.66□□□□□ -0.7
Cdx2P43241 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Cdx2P43241 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx2P43241 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.66□□□□□ -0.7
Cdx2P43241 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx2P43241 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx2P43241 Erich3-203ENSMUST00000189969 3460 ntBASIC10.66□□□□□ -0.7
Cdx2P43241 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx2P43241 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx2P43241 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx2P43241 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx2P43241 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx2P43241 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Cdx2P43241 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.66□□□□□ -0.7
Cdx2P43241 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx2P43241 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Cdx2P43241 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx2P43241 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx2P43241 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx2P43241 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdx2P43241 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdx2P43241 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdx2P43241 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdx2P43241 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdx2P43241 Gm44153-201ENSMUST00000204162 1580 ntBASIC10.65□□□□□ -0.7
Cdx2P43241 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdx2P43241 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Cdx2P43241 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdx2P43241 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cdx2P43241 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdx2P43241 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdx2P43241 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdx2P43241 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Cdx2P43241 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cdx2P43241 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cdx2P43241 Gm12337-201ENSMUST00000119634 400 ntBASIC10.65□□□□□ -0.7
Cdx2P43241 Gng5-ps-201ENSMUST00000120931 205 ntBASIC10.65□□□□□ -0.7
Cdx2P43241 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cdx2P43241 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC10.65□□□□□ -0.7
Cdx2P43241 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.65□□□□□ -0.7
Cdx2P43241 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC10.65□□□□□ -0.7
Cdx2P43241 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC10.65□□□□□ -0.7
Cdx2P43241 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC10.65□□□□□ -0.7
Cdx2P43241 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cdx2P43241 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC10.65□□□□□ -0.7
Cdx2P43241 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cdx2P43241 Gm7238-201ENSMUST00000206467 973 ntBASIC10.65□□□□□ -0.7
Cdx2P43241 Gm9204-201ENSMUST00000212641 947 ntBASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms