Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
HttP42859 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC11.49□□□□□ -0.57
HttP42859 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC11.49□□□□□ -0.57
HttP42859 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
HttP42859 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HttP42859 Gm33180-201ENSMUST00000217109 1480 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
HttP42859 Gm5910-201ENSMUST00000211819 1746 ntBASIC11.49□□□□□ -0.57
HttP42859 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
HttP42859 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.49□□□□□ -0.57
HttP42859 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
HttP42859 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HttP42859 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HttP42859 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HttP42859 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
HttP42859 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
HttP42859 Gm14407-201ENSMUST00000121260 447 ntBASIC11.49□□□□□ -0.57
HttP42859 4933439K11Rik-202ENSMUST00000140307 941 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
HttP42859 1700018A04Rik-203ENSMUST00000150418 706 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
HttP42859 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
HttP42859 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC11.49□□□□□ -0.57
HttP42859 Gm44767-201ENSMUST00000206634 469 ntTSL 5 BASIC11.49□□□□□ -0.57
HttP42859 Gm18646-201ENSMUST00000212240 1063 ntBASIC11.49□□□□□ -0.57
HttP42859 1700029N11Rik-203ENSMUST00000220639 1092 ntTSL 5 BASIC11.49□□□□□ -0.57
HttP42859 Olfr533-201ENSMUST00000071755 1052 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
HttP42859 Gm32072-201ENSMUST00000200803 1434 ntBASIC11.48□□□□□ -0.57
HttP42859 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HttP42859 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.48□□□□□ -0.57
HttP42859 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
HttP42859 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HttP42859 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
HttP42859 Gm28309-201ENSMUST00000136302 623 ntTSL 5 BASIC11.48□□□□□ -0.57
HttP42859 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC11.48□□□□□ -0.57
HttP42859 AC161877.1-201ENSMUST00000227736 699 ntBASIC11.48□□□□□ -0.57
HttP42859 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HttP42859 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
HttP42859 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
HttP42859 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HttP42859 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HttP42859 A830018L16Rik-203ENSMUST00000137824 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
HttP42859 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
HttP42859 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HttP42859 Efna1-201ENSMUST00000029566 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HttP42859 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
HttP42859 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HttP42859 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC11.48□□□□□ -0.57
HttP42859 Gm11546-201ENSMUST00000120297 354 ntBASIC11.48□□□□□ -0.57
HttP42859 Olfr754-ps1-201ENSMUST00000173181 911 ntBASIC11.48□□□□□ -0.57
HttP42859 Gm26241-201ENSMUST00000174944 101 ntBASIC11.48□□□□□ -0.57
HttP42859 Gm23976-201ENSMUST00000175001 101 ntBASIC11.48□□□□□ -0.57
HttP42859 Gm22463-201ENSMUST00000175274 101 ntBASIC11.48□□□□□ -0.57
HttP42859 Gm22547-201ENSMUST00000175281 101 ntBASIC11.48□□□□□ -0.57
HttP42859 Gm22913-201ENSMUST00000175297 101 ntBASIC11.48□□□□□ -0.57
HttP42859 Gm23282-201ENSMUST00000175306 101 ntBASIC11.48□□□□□ -0.57
HttP42859 Gm25972-201ENSMUST00000175374 101 ntBASIC11.48□□□□□ -0.57
HttP42859 Gm22414-201ENSMUST00000175466 101 ntBASIC11.48□□□□□ -0.57
HttP42859 Gm26235-201ENSMUST00000175533 101 ntBASIC11.48□□□□□ -0.57
HttP42859 Gm25084-201ENSMUST00000175556 101 ntBASIC11.48□□□□□ -0.57
HttP42859 Gm24973-201ENSMUST00000175588 101 ntBASIC11.48□□□□□ -0.57
HttP42859 Gm23292-201ENSMUST00000175618 101 ntBASIC11.48□□□□□ -0.57
HttP42859 Gm23646-201ENSMUST00000178119 101 ntBASIC11.48□□□□□ -0.57
HttP42859 Gm24643-201ENSMUST00000178305 101 ntBASIC11.48□□□□□ -0.57
HttP42859 Gm24302-201ENSMUST00000178350 101 ntBASIC11.48□□□□□ -0.57
HttP42859 Gm26386-201ENSMUST00000178407 101 ntBASIC11.48□□□□□ -0.57
HttP42859 Gm25458-201ENSMUST00000178981 101 ntBASIC11.48□□□□□ -0.57
HttP42859 Gm22825-201ENSMUST00000179444 101 ntBASIC11.48□□□□□ -0.57
HttP42859 Ptma-202ENSMUST00000186255 768 ntTSL 2 BASIC11.48□□□□□ -0.57
HttP42859 Gm29485-201ENSMUST00000190220 282 ntBASIC11.48□□□□□ -0.57
HttP42859 Gm39481-201ENSMUST00000210379 512 ntBASIC11.48□□□□□ -0.57
HttP42859 4930547H16Rik-201ENSMUST00000222281 907 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
HttP42859 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HttP42859 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.48□□□□□ -0.57
HttP42859 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HttP42859 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HttP42859 Gm6682-201ENSMUST00000169666 1346 ntBASIC11.48□□□□□ -0.57
HttP42859 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
HttP42859 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
HttP42859 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
HttP42859 Tbxas1-206ENSMUST00000162521 1427 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
HttP42859 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
HttP42859 Pard3bos3-201ENSMUST00000147177 862 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
HttP42859 Vmn2r-ps7-201ENSMUST00000176244 1098 ntBASIC11.47□□□□□ -0.57
HttP42859 Gm44139-201ENSMUST00000204903 373 ntBASIC11.47□□□□□ -0.57
HttP42859 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC11.47□□□□□ -0.57
HttP42859 Htr1b-201ENSMUST00000051005 1273 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
HttP42859 Rpl15-ps3-201ENSMUST00000088480 615 ntBASIC11.47□□□□□ -0.57
HttP42859 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
HttP42859 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
HttP42859 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
HttP42859 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
HttP42859 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.47□□□□□ -0.57
HttP42859 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
HttP42859 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
HttP42859 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
HttP42859 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
HttP42859 Gm24470-201ENSMUST00000104486 132 ntBASIC11.47□□□□□ -0.57
HttP42859 Gm16418-201ENSMUST00000118577 171 ntBASIC11.47□□□□□ -0.57
HttP42859 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC11.47□□□□□ -0.57
HttP42859 Gm7516-201ENSMUST00000186198 706 ntBASIC11.47□□□□□ -0.57
HttP42859 Gm22982-201ENSMUST00000082613 319 ntBASIC11.47□□□□□ -0.57
HttP42859 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms