Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Cxcl12P40224 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcl12P40224 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcl12P40224 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcl12P40224 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC11.54□□□□□ -0.56
Cxcl12P40224 Gm8725-201ENSMUST00000221829 1333 ntBASIC11.54□□□□□ -0.56
Cxcl12P40224 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcl12P40224 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcl12P40224 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Cxcl12P40224 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcl12P40224 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.54□□□□□ -0.56
Cxcl12P40224 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Cxcl12P40224 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcl12P40224 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcl12P40224 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcl12P40224 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC11.54□□□□□ -0.56
Cxcl12P40224 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Cxcl12P40224 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl12P40224 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl12P40224 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl12P40224 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl12P40224 Gm13608-201ENSMUST00000121807 1406 ntBASIC11.53□□□□□ -0.56
Cxcl12P40224 Gm8873-201ENSMUST00000217847 1439 ntBASIC11.53□□□□□ -0.56
Cxcl12P40224 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl12P40224 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Cxcl12P40224 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl12P40224 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl12P40224 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl12P40224 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl12P40224 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl12P40224 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.53□□□□□ -0.56
Cxcl12P40224 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cxcl12P40224 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl12P40224 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl12P40224 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cxcl12P40224 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl12P40224 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cxcl12P40224 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC11.53□□□□□ -0.56
Cxcl12P40224 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl12P40224 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC11.53□□□□□ -0.56
Cxcl12P40224 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cxcl12P40224 Gm28671-201ENSMUST00000187036 692 ntBASIC11.53□□□□□ -0.56
Cxcl12P40224 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC11.53□□□□□ -0.56
Cxcl12P40224 Gm7242-201ENSMUST00000221134 705 ntBASIC11.53□□□□□ -0.56
Cxcl12P40224 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC11.53□□□□□ -0.56
Cxcl12P40224 AC133496.1-201ENSMUST00000223891 743 ntBASIC11.53□□□□□ -0.56
Cxcl12P40224 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl12P40224 Mir341-201ENSMUST00000093593 96 ntBASIC11.53□□□□□ -0.56
Cxcl12P40224 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl12P40224 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl12P40224 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl12P40224 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.53□□□□□ -0.56
Cxcl12P40224 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.53□□□□□ -0.56
Cxcl12P40224 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl12P40224 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl12P40224 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl12P40224 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.53□□□□□ -0.56
Cxcl12P40224 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.53□□□□□ -0.56
Cxcl12P40224 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl12P40224 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl12P40224 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cxcl12P40224 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl12P40224 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl12P40224 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcl12P40224 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcl12P40224 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcl12P40224 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcl12P40224 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Cxcl12P40224 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcl12P40224 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcl12P40224 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcl12P40224 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Cxcl12P40224 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.52□□□□□ -0.56
Cxcl12P40224 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Cxcl12P40224 Gm7701-201ENSMUST00000163185 1479 ntBASIC11.52□□□□□ -0.56
Cxcl12P40224 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcl12P40224 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcl12P40224 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcl12P40224 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcl12P40224 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcl12P40224 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcl12P40224 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcl12P40224 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcl12P40224 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcl12P40224 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcl12P40224 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcl12P40224 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcl12P40224 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcl12P40224 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcl12P40224 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Cxcl12P40224 Gm6238-201ENSMUST00000120999 465 ntBASIC11.52□□□□□ -0.57
Cxcl12P40224 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcl12P40224 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC11.52□□□□□ -0.57
Cxcl12P40224 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cxcl12P40224 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC11.52□□□□□ -0.57
Cxcl12P40224 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcl12P40224 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC11.52□□□□□ -0.57
Cxcl12P40224 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcl12P40224 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcl12P40224 Gm18555-201ENSMUST00000197935 584 ntBASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms