Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Fen1P39749 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fen1P39749 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Fen1P39749 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fen1P39749 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Fen1P39749 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fen1P39749 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Fen1P39749 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.26□□□□□ -0.61
Fen1P39749 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fen1P39749 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.26□□□□□ -0.61
Fen1P39749 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.26□□□□□ -0.61
Fen1P39749 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.26□□□□□ -0.61
Fen1P39749 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.26□□□□□ -0.61
Fen1P39749 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.26□□□□□ -0.61
Fen1P39749 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.26□□□□□ -0.61
Fen1P39749 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.26□□□□□ -0.61
Fen1P39749 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.26□□□□□ -0.61
Fen1P39749 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.26□□□□□ -0.61
Fen1P39749 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.26□□□□□ -0.61
Fen1P39749 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.26□□□□□ -0.61
Fen1P39749 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fen1P39749 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fen1P39749 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fen1P39749 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.26□□□□□ -0.61
Fen1P39749 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fen1P39749 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fen1P39749 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Fen1P39749 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Fen1P39749 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Fen1P39749 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fen1P39749 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Fen1P39749 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fen1P39749 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fen1P39749 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Fen1P39749 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fen1P39749 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Fen1P39749 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.26□□□□□ -0.61
Fen1P39749 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fen1P39749 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fen1P39749 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Fen1P39749 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Fen1P39749 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.25□□□□□ -0.61
Fen1P39749 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.25□□□□□ -0.61
Fen1P39749 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Fen1P39749 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Fen1P39749 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fen1P39749 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Fen1P39749 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Fen1P39749 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Fen1P39749 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Fen1P39749 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.25□□□□□ -0.61
Fen1P39749 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.25□□□□□ -0.61
Fen1P39749 Gm25890-201ENSMUST00000177643 165 ntBASIC11.25□□□□□ -0.61
Fen1P39749 Gm4310-201ENSMUST00000177847 889 ntBASIC11.25□□□□□ -0.61
Fen1P39749 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.25□□□□□ -0.61
Fen1P39749 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.25□□□□□ -0.61
Fen1P39749 Gm22614-201ENSMUST00000178300 165 ntBASIC11.25□□□□□ -0.61
Fen1P39749 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Fen1P39749 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.25□□□□□ -0.61
Fen1P39749 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.25□□□□□ -0.61
Fen1P39749 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.25□□□□□ -0.61
Fen1P39749 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.25□□□□□ -0.61
Fen1P39749 Gm9797-202ENSMUST00000218003 294 ntBASIC11.25□□□□□ -0.61
Fen1P39749 Gm7940-201ENSMUST00000218195 769 ntBASIC11.25□□□□□ -0.61
Fen1P39749 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.25□□□□□ -0.61
Fen1P39749 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fen1P39749 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fen1P39749 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Fen1P39749 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fen1P39749 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Fen1P39749 Gm22042-201ENSMUST00000082989 165 ntBASIC11.25□□□□□ -0.61
Fen1P39749 Gm26110-201ENSMUST00000083971 165 ntBASIC11.25□□□□□ -0.61
Fen1P39749 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fen1P39749 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fen1P39749 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Fen1P39749 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Fen1P39749 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.25□□□□□ -0.61
Fen1P39749 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fen1P39749 Gm45828-201ENSMUST00000206938 1836 ntBASIC11.25□□□□□ -0.61
Fen1P39749 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Fen1P39749 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fen1P39749 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fen1P39749 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fen1P39749 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fen1P39749 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC11.25□□□□□ -0.61
Fen1P39749 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Fen1P39749 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC11.25□□□□□ -0.61
Fen1P39749 CT868720.1-201ENSMUST00000223069 2544 ntBASIC11.25□□□□□ -0.61
Fen1P39749 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fen1P39749 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fen1P39749 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Fen1P39749 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Fen1P39749 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fen1P39749 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Fen1P39749 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC11.24□□□□□ -0.61
Fen1P39749 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fen1P39749 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.24□□□□□ -0.61
Fen1P39749 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fen1P39749 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fen1P39749 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms