Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm8956-201ENSMUST00000203939 825 ntBASIC10.25□□□□□ -0.77
Nedd8P29595 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.25□□□□□ -0.77
Nedd8P29595 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.25□□□□□ -0.77
Nedd8P29595 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nedd8P29595 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.25□□□□□ -0.77
Nedd8P29595 Gm17794-201ENSMUST00000220252 955 ntBASIC10.25□□□□□ -0.77
Nedd8P29595 CT030657.3-201ENSMUST00000222707 1200 ntBASIC10.25□□□□□ -0.77
Nedd8P29595 AC154461.3-201ENSMUST00000224831 573 ntBASIC10.25□□□□□ -0.77
Nedd8P29595 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nedd8P29595 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nedd8P29595 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC10.25□□□□□ -0.77
Nedd8P29595 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nedd8P29595 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC10.25□□□□□ -0.77
Nedd8P29595 Gm21115-201ENSMUST00000187565 2578 ntBASIC10.25□□□□□ -0.77
Nedd8P29595 5830462I19Rik-201ENSMUST00000168137 3383 ntBASIC10.25□□□□□ -0.77
Nedd8P29595 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.25□□□□□ -0.77
Nedd8P29595 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nedd8P29595 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nedd8P29595 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nedd8P29595 Diaph1-201ENSMUST00000025337 5596 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Nedd8P29595 Fubp1-201ENSMUST00000106121 4525 ntAPPRIS P2 TSL 2 BASIC10.25□□□□□ -0.77
Nedd8P29595 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nedd8P29595 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nedd8P29595 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
Nedd8P29595 Adcy3-201ENSMUST00000020984 4348 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nedd8P29595 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nedd8P29595 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC10.25□□□□□ -0.77
Nedd8P29595 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nedd8P29595 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nedd8P29595 Thsd7b-201ENSMUST00000040311 3895 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nedd8P29595 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nedd8P29595 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nedd8P29595 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nedd8P29595 Gm26673-201ENSMUST00000181126 3377 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nedd8P29595 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nedd8P29595 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nedd8P29595 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nedd8P29595 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nedd8P29595 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC10.24□□□□□ -0.77
Nedd8P29595 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.24□□□□□ -0.77
Nedd8P29595 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.24□□□□□ -0.77
Nedd8P29595 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nedd8P29595 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nedd8P29595 Ptk2b-202ENSMUST00000089250 3903 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nedd8P29595 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nedd8P29595 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nedd8P29595 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nedd8P29595 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nedd8P29595 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nedd8P29595 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nedd8P29595 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Nedd8P29595 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC10.24□□□□□ -0.77
Nedd8P29595 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Nedd8P29595 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Nedd8P29595 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Nedd8P29595 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.24□□□□□ -0.77
Nedd8P29595 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.24□□□□□ -0.77
Nedd8P29595 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.24□□□□□ -0.77
Nedd8P29595 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.24□□□□□ -0.77
Nedd8P29595 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC10.24□□□□□ -0.77
Nedd8P29595 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.24□□□□□ -0.77
Nedd8P29595 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nedd8P29595 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.24□□□□□ -0.77
Nedd8P29595 Gm27486-201ENSMUST00000184923 80 ntBASIC10.24□□□□□ -0.77
Nedd8P29595 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC10.24□□□□□ -0.77
Nedd8P29595 Gm18018-201ENSMUST00000198273 408 ntBASIC10.24□□□□□ -0.77
Nedd8P29595 Gm9353-201ENSMUST00000200472 604 ntBASIC10.24□□□□□ -0.77
Nedd8P29595 Gm4607-201ENSMUST00000206649 577 ntBASIC10.24□□□□□ -0.77
Nedd8P29595 AC137950.2-201ENSMUST00000227127 1089 ntBASIC10.24□□□□□ -0.77
Nedd8P29595 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nedd8P29595 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nedd8P29595 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nedd8P29595 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nedd8P29595 Carmil1-202ENSMUST00000110398 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nedd8P29595 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Nedd8P29595 Gm21039-201ENSMUST00000223359 2012 ntBASIC10.24□□□□□ -0.77
Nedd8P29595 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nedd8P29595 Gm10748-202ENSMUST00000194396 2379 ntBASIC10.24□□□□□ -0.77
Nedd8P29595 Fbxl12-206ENSMUST00000148631 3756 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nedd8P29595 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.24□□□□□ -0.77
Nedd8P29595 Mlph-201ENSMUST00000027528 4499 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nedd8P29595 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nedd8P29595 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Nedd8P29595 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Nedd8P29595 Duoxa1-203ENSMUST00000110538 2467 ntTSL 5 BASIC10.24□□□□□ -0.77
Nedd8P29595 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nedd8P29595 Anks1b-210ENSMUST00000182113 3553 ntTSL 5 BASIC10.24□□□□□ -0.77
Nedd8P29595 Nectin4-203ENSMUST00000111286 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nedd8P29595 Rab36-207ENSMUST00000147802 3291 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Nedd8P29595 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nedd8P29595 Agbl5-201ENSMUST00000069705 2922 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nedd8P29595 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nedd8P29595 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nedd8P29595 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.23□□□□□ -0.77
Nedd8P29595 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nedd8P29595 Gm7742-201ENSMUST00000167648 1527 ntBASIC10.23□□□□□ -0.77
Nedd8P29595 Gm7732-201ENSMUST00000170486 1527 ntBASIC10.23□□□□□ -0.77
Nedd8P29595 Gm7740-201ENSMUST00000186171 1527 ntBASIC10.23□□□□□ -0.77
Nedd8P29595 Gm7736-201ENSMUST00000096981 1527 ntBASIC10.23□□□□□ -0.77
Nedd8P29595 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms