Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vcam1P29533 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vcam1P29533 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC12.84□□□□□ -0.35
Vcam1P29533 Gm43167-201ENSMUST00000202001 1606 ntBASIC12.84□□□□□ -0.35
Vcam1P29533 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vcam1P29533 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC12.84□□□□□ -0.35
Vcam1P29533 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vcam1P29533 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Vcam1P29533 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Vcam1P29533 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Vcam1P29533 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Vcam1P29533 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vcam1P29533 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vcam1P29533 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vcam1P29533 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vcam1P29533 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vcam1P29533 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Vcam1P29533 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.83□□□□□ -0.36
Vcam1P29533 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vcam1P29533 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vcam1P29533 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vcam1P29533 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vcam1P29533 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vcam1P29533 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Vcam1P29533 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vcam1P29533 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vcam1P29533 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vcam1P29533 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC12.83□□□□□ -0.36
Vcam1P29533 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vcam1P29533 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vcam1P29533 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC12.83□□□□□ -0.36
Vcam1P29533 n-R5s130-201ENSMUST00000178128 119 ntBASIC12.83□□□□□ -0.36
Vcam1P29533 Gm24312-201ENSMUST00000178677 119 ntBASIC12.83□□□□□ -0.36
Vcam1P29533 n-R5s106-201ENSMUST00000179060 119 ntBASIC12.83□□□□□ -0.36
Vcam1P29533 n-R5s118-201ENSMUST00000179887 119 ntBASIC12.83□□□□□ -0.36
Vcam1P29533 Gm27440-201ENSMUST00000184785 107 ntBASIC12.83□□□□□ -0.36
Vcam1P29533 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vcam1P29533 Ighv5-8-202ENSMUST00000191967 337 ntBASIC12.83□□□□□ -0.36
Vcam1P29533 Gm6352-201ENSMUST00000203583 1134 ntBASIC12.83□□□□□ -0.36
Vcam1P29533 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC12.83□□□□□ -0.36
Vcam1P29533 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC12.83□□□□□ -0.36
Vcam1P29533 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC12.83□□□□□ -0.36
Vcam1P29533 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vcam1P29533 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Vcam1P29533 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Vcam1P29533 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vcam1P29533 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vcam1P29533 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vcam1P29533 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vcam1P29533 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vcam1P29533 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Vcam1P29533 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Vcam1P29533 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vcam1P29533 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vcam1P29533 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vcam1P29533 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vcam1P29533 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vcam1P29533 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vcam1P29533 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcam1P29533 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcam1P29533 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC12.82□□□□□ -0.36
Vcam1P29533 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.82□□□□□ -0.36
Vcam1P29533 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcam1P29533 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vcam1P29533 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Vcam1P29533 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC12.82□□□□□ -0.36
Vcam1P29533 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.82□□□□□ -0.36
Vcam1P29533 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcam1P29533 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vcam1P29533 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Vcam1P29533 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vcam1P29533 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcam1P29533 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcam1P29533 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcam1P29533 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcam1P29533 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC12.82□□□□□ -0.36
Vcam1P29533 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC12.82□□□□□ -0.36
Vcam1P29533 Gm12948-201ENSMUST00000119406 682 ntBASIC12.82□□□□□ -0.36
Vcam1P29533 Gm5555-201ENSMUST00000120352 1111 ntBASIC12.82□□□□□ -0.36
Vcam1P29533 Gm22344-201ENSMUST00000122642 278 ntBASIC12.82□□□□□ -0.36
Vcam1P29533 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vcam1P29533 Gm25226-201ENSMUST00000158198 123 ntBASIC12.82□□□□□ -0.36
Vcam1P29533 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC12.82□□□□□ -0.36
Vcam1P29533 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.82□□□□□ -0.36
Vcam1P29533 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcam1P29533 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcam1P29533 Gm45135-201ENSMUST00000206787 1184 ntBASIC12.82□□□□□ -0.36
Vcam1P29533 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vcam1P29533 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcam1P29533 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vcam1P29533 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.82□□□□□ -0.36
Vcam1P29533 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcam1P29533 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcam1P29533 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.82□□□□□ -0.36
Vcam1P29533 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcam1P29533 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC12.82□□□□□ -0.36
Vcam1P29533 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Vcam1P29533 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcam1P29533 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Vcam1P29533 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms