Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc180J3QNE4 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Ccdc180J3QNE4 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc180J3QNE4 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC20.16■□□□□ 0.82
Ccdc180J3QNE4 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc180J3QNE4 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc180J3QNE4 Gm15636-201ENSMUST00000119205 668 ntBASIC20.16■□□□□ 0.82
Ccdc180J3QNE4 Mipep-ps-201ENSMUST00000177439 291 ntBASIC20.16■□□□□ 0.82
Ccdc180J3QNE4 Gm5040-201ENSMUST00000218609 800 ntBASIC20.16■□□□□ 0.82
Ccdc180J3QNE4 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
Ccdc180J3QNE4 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc180J3QNE4 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Ccdc180J3QNE4 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc180J3QNE4 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Ccdc180J3QNE4 Gm38312-201ENSMUST00000195426 1746 ntBASIC20.15■□□□□ 0.82
Ccdc180J3QNE4 Gm42858-201ENSMUST00000202512 1704 ntBASIC20.15■□□□□ 0.82
Ccdc180J3QNE4 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc180J3QNE4 Gm43984-201ENSMUST00000204572 2864 ntBASIC20.15■□□□□ 0.82
Ccdc180J3QNE4 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc180J3QNE4 Gm5395-201ENSMUST00000121650 915 ntBASIC20.15■□□□□ 0.82
Ccdc180J3QNE4 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Ccdc180J3QNE4 Gm5244-201ENSMUST00000164001 339 ntBASIC20.15■□□□□ 0.82
Ccdc180J3QNE4 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc180J3QNE4 Gm5976-201ENSMUST00000180794 996 ntBASIC20.15■□□□□ 0.82
Ccdc180J3QNE4 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc180J3QNE4 AC154585.1-201ENSMUST00000218917 997 ntBASIC20.15■□□□□ 0.82
Ccdc180J3QNE4 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc180J3QNE4 AC116797.2-202ENSMUST00000223587 1017 ntBASIC20.15■□□□□ 0.82
Ccdc180J3QNE4 AC134860.2-201ENSMUST00000225277 1036 ntBASIC20.15■□□□□ 0.82
Ccdc180J3QNE4 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Ccdc180J3QNE4 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc180J3QNE4 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc180J3QNE4 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc180J3QNE4 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
Ccdc180J3QNE4 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc180J3QNE4 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC20.15■□□□□ 0.82
Ccdc180J3QNE4 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc180J3QNE4 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC20.14■□□□□ 0.82
Ccdc180J3QNE4 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ccdc180J3QNE4 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Ccdc180J3QNE4 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Ccdc180J3QNE4 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc180J3QNE4 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc180J3QNE4 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc180J3QNE4 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC20.14■□□□□ 0.81
Ccdc180J3QNE4 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc180J3QNE4 Cd9-ps-201ENSMUST00000174687 650 ntBASIC20.14■□□□□ 0.81
Ccdc180J3QNE4 Gm5302-201ENSMUST00000202130 796 ntBASIC20.14■□□□□ 0.81
Ccdc180J3QNE4 AC121567.1-201ENSMUST00000227213 842 ntBASIC20.14■□□□□ 0.81
Ccdc180J3QNE4 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc180J3QNE4 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc180J3QNE4 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC20.14■□□□□ 0.81
Ccdc180J3QNE4 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc180J3QNE4 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc180J3QNE4 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc180J3QNE4 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc180J3QNE4 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc180J3QNE4 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Gm16441-201ENSMUST00000138176 924 ntBASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Gm6038-201ENSMUST00000154310 948 ntBASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Gm6612-201ENSMUST00000170777 395 ntBASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Gm3527-201ENSMUST00000198905 460 ntBASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Gm37858-201ENSMUST00000192759 1231 ntBASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc180J3QNE4 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc180J3QNE4 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc180J3QNE4 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc180J3QNE4 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc180J3QNE4 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc180J3QNE4 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc180J3QNE4 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc180J3QNE4 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms