Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atf6F6VAN0 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atf6F6VAN0 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atf6F6VAN0 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Atf6F6VAN0 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atf6F6VAN0 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC11.52□□□□□ -0.57
Atf6F6VAN0 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atf6F6VAN0 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atf6F6VAN0 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atf6F6VAN0 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC11.52□□□□□ -0.57
Atf6F6VAN0 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.52□□□□□ -0.57
Atf6F6VAN0 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.52□□□□□ -0.57
Atf6F6VAN0 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atf6F6VAN0 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atf6F6VAN0 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Atf6F6VAN0 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.52□□□□□ -0.57
Atf6F6VAN0 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.52□□□□□ -0.57
Atf6F6VAN0 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Atf6F6VAN0 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atf6F6VAN0 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.51□□□□□ -0.57
Atf6F6VAN0 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.51□□□□□ -0.57
Atf6F6VAN0 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Gm12218-201ENSMUST00000117666 399 ntBASIC11.51□□□□□ -0.57
Atf6F6VAN0 Gm15615-201ENSMUST00000118876 198 ntBASIC11.51□□□□□ -0.57
Atf6F6VAN0 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.51□□□□□ -0.57
Atf6F6VAN0 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Gm4726-201ENSMUST00000135604 736 ntBASIC11.51□□□□□ -0.57
Atf6F6VAN0 Gm6019-201ENSMUST00000148369 736 ntBASIC11.51□□□□□ -0.57
Atf6F6VAN0 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Gm21778-201ENSMUST00000178779 471 ntBASIC11.51□□□□□ -0.57
Atf6F6VAN0 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Gm43058-201ENSMUST00000197645 625 ntBASIC11.51□□□□□ -0.57
Atf6F6VAN0 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Hesx1-201ENSMUST00000035433 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Gm23105-201ENSMUST00000083719 134 ntBASIC11.51□□□□□ -0.57
Atf6F6VAN0 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atf6F6VAN0 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atf6F6VAN0 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Atf6F6VAN0 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atf6F6VAN0 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Atf6F6VAN0 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atf6F6VAN0 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atf6F6VAN0 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC11.5□□□□□ -0.57
Atf6F6VAN0 Gm44153-201ENSMUST00000204162 1580 ntBASIC11.5□□□□□ -0.57
Atf6F6VAN0 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.5□□□□□ -0.57
Atf6F6VAN0 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atf6F6VAN0 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atf6F6VAN0 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Atf6F6VAN0 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atf6F6VAN0 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atf6F6VAN0 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atf6F6VAN0 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Atf6F6VAN0 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atf6F6VAN0 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atf6F6VAN0 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Atf6F6VAN0 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atf6F6VAN0 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atf6F6VAN0 Gm12813-201ENSMUST00000119615 902 ntBASIC11.5□□□□□ -0.57
Atf6F6VAN0 Gm15432-201ENSMUST00000121106 195 ntBASIC11.5□□□□□ -0.57
Atf6F6VAN0 Gm12566-201ENSMUST00000121479 359 ntBASIC11.5□□□□□ -0.57
Atf6F6VAN0 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Atf6F6VAN0 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC11.5□□□□□ -0.57
Atf6F6VAN0 Gm25492-201ENSMUST00000157383 129 ntBASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms