Protein–RNA interactions for Protein: A0A0R3P9D1

Gm42688, Predicted gene 42688, mousemouse

Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm42688A0A0R3P9D1 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm42688A0A0R3P9D1 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm42688A0A0R3P9D1 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm42688A0A0R3P9D1 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm42688A0A0R3P9D1 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Gm42688A0A0R3P9D1 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm42688A0A0R3P9D1 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm42688A0A0R3P9D1 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm42688A0A0R3P9D1 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.53□□□□□ -0.4
Gm42688A0A0R3P9D1 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Gm42688A0A0R3P9D1 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm42688A0A0R3P9D1 Gm38246-201ENSMUST00000194318 1511 ntBASIC12.52□□□□□ -0.4
Gm42688A0A0R3P9D1 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm42688A0A0R3P9D1 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.52□□□□□ -0.4
Gm42688A0A0R3P9D1 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm42688A0A0R3P9D1 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm42688A0A0R3P9D1 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Gm42688A0A0R3P9D1 Gm5739-201ENSMUST00000208601 1703 ntBASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 Defa-ps16-201ENSMUST00000121939 171 ntBASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 Mir1893-201ENSMUST00000122565 83 ntBASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm42688A0A0R3P9D1 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Gm5845-201ENSMUST00000195812 796 ntBASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Gm5507-201ENSMUST00000091897 1008 ntBASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Cog3-203ENSMUST00000227473 4197 ntBASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 AC090962.2-201ENSMUST00000225064 1801 ntBASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm42688A0A0R3P9D1 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Gm42688A0A0R3P9D1 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm42688A0A0R3P9D1 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm42688A0A0R3P9D1 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Gm42688A0A0R3P9D1 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm42688A0A0R3P9D1 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm42688A0A0R3P9D1 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm42688A0A0R3P9D1 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm42688A0A0R3P9D1 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm42688A0A0R3P9D1 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm42688A0A0R3P9D1 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms