Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn11aQ9R053 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn11aQ9R053 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn11aQ9R053 CT025689.1-201ENSMUST00000225214 283 ntBASIC13.11□□□□□ -0.31
Scn11aQ9R053 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Scn11aQ9R053 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Scn11aQ9R053 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn11aQ9R053 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn11aQ9R053 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Scn11aQ9R053 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn11aQ9R053 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC13.11□□□□□ -0.31
Scn11aQ9R053 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.11□□□□□ -0.31
Scn11aQ9R053 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn11aQ9R053 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Scn11aQ9R053 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn11aQ9R053 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.11□□□□□ -0.31
Scn11aQ9R053 Gm8968-201ENSMUST00000199133 1303 ntBASIC13.11□□□□□ -0.31
Scn11aQ9R053 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.1□□□□□ -0.31
Scn11aQ9R053 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Gm12947-201ENSMUST00000116114 420 ntBASIC13.1□□□□□ -0.31
Scn11aQ9R053 Gm16441-201ENSMUST00000138176 924 ntBASIC13.1□□□□□ -0.31
Scn11aQ9R053 Gm24074-201ENSMUST00000158178 260 ntBASIC13.1□□□□□ -0.31
Scn11aQ9R053 Gm6612-201ENSMUST00000170777 395 ntBASIC13.1□□□□□ -0.31
Scn11aQ9R053 Gm7765-201ENSMUST00000182585 974 ntBASIC13.1□□□□□ -0.31
Scn11aQ9R053 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Gm27675-201ENSMUST00000184527 94 ntBASIC13.1□□□□□ -0.31
Scn11aQ9R053 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC13.1□□□□□ -0.31
Scn11aQ9R053 Gm18539-201ENSMUST00000204745 1090 ntBASIC13.1□□□□□ -0.31
Scn11aQ9R053 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC13.1□□□□□ -0.31
Scn11aQ9R053 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC13.1□□□□□ -0.31
Scn11aQ9R053 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Nsmce2-203ENSMUST00000227173 1122 ntBASIC13.1□□□□□ -0.31
Scn11aQ9R053 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Scn11aQ9R053 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC13.1□□□□□ -0.31
Scn11aQ9R053 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.1□□□□□ -0.31
Scn11aQ9R053 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn11aQ9R053 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC13.09□□□□□ -0.31
Scn11aQ9R053 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC13.09□□□□□ -0.31
Scn11aQ9R053 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn11aQ9R053 Gm25872-201ENSMUST00000177784 100 ntBASIC13.09□□□□□ -0.31
Scn11aQ9R053 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scn11aQ9R053 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC13.09□□□□□ -0.31
Scn11aQ9R053 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC13.09□□□□□ -0.31
Scn11aQ9R053 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC13.09□□□□□ -0.31
Scn11aQ9R053 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC13.09□□□□□ -0.31
Scn11aQ9R053 Gm8557-201ENSMUST00000220777 475 ntBASIC13.09□□□□□ -0.31
Scn11aQ9R053 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC13.09□□□□□ -0.31
Scn11aQ9R053 AC154213.1-201ENSMUST00000228234 583 ntBASIC13.09□□□□□ -0.31
Scn11aQ9R053 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Scn11aQ9R053 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scn11aQ9R053 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn11aQ9R053 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scn11aQ9R053 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn11aQ9R053 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn11aQ9R053 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn11aQ9R053 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scn11aQ9R053 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Scn11aQ9R053 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn11aQ9R053 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn11aQ9R053 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Scn11aQ9R053 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn11aQ9R053 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC13.09□□□□□ -0.31
Scn11aQ9R053 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn11aQ9R053 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn11aQ9R053 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scn11aQ9R053 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn11aQ9R053 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Scn11aQ9R053 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn11aQ9R053 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Scn11aQ9R053 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.09□□□□□ -0.31
Scn11aQ9R053 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms