Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.02□□□□□ -0.64
Rrp8Q9DB85 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Rrp8Q9DB85 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rrp8Q9DB85 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rrp8Q9DB85 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Rrp8Q9DB85 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rrp8Q9DB85 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rrp8Q9DB85 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Rrp8Q9DB85 Gm13981-201ENSMUST00000122360 447 ntBASIC11.02□□□□□ -0.65
Rrp8Q9DB85 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rrp8Q9DB85 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rrp8Q9DB85 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC11.02□□□□□ -0.65
Rrp8Q9DB85 Gm19246-201ENSMUST00000173599 255 ntBASIC11.02□□□□□ -0.65
Rrp8Q9DB85 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rrp8Q9DB85 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.02□□□□□ -0.65
Rrp8Q9DB85 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC11.02□□□□□ -0.65
Rrp8Q9DB85 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC11.02□□□□□ -0.65
Rrp8Q9DB85 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC11.02□□□□□ -0.65
Rrp8Q9DB85 CT010480.2-201ENSMUST00000225424 737 ntBASIC11.02□□□□□ -0.65
Rrp8Q9DB85 Gm9791-201ENSMUST00000060997 447 ntBASIC11.02□□□□□ -0.65
Rrp8Q9DB85 Gm8894-201ENSMUST00000074642 666 ntBASIC11.02□□□□□ -0.65
Rrp8Q9DB85 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Rrp8Q9DB85 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rrp8Q9DB85 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rrp8Q9DB85 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.02□□□□□ -0.65
Rrp8Q9DB85 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rrp8Q9DB85 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rrp8Q9DB85 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rrp8Q9DB85 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Rrp8Q9DB85 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Rrp8Q9DB85 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.02□□□□□ -0.65
Rrp8Q9DB85 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rrp8Q9DB85 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Rrp8Q9DB85 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Snord23-201ENSMUST00000116828 109 ntBASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Gm4917-201ENSMUST00000121452 650 ntBASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Gm19013-201ENSMUST00000183895 1222 ntBASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Gm19014-201ENSMUST00000184828 1189 ntBASIC11.01□□□□□ -0.65
Rrp8Q9DB85 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Gm5178-201ENSMUST00000219380 898 ntBASIC11.01□□□□□ -0.65
Rrp8Q9DB85 CT025689.1-201ENSMUST00000225214 283 ntBASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Gm42941-201ENSMUST00000200347 1321 ntBASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rrp8Q9DB85 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Rrp8Q9DB85 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rrp8Q9DB85 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rrp8Q9DB85 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Rrp8Q9DB85 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rrp8Q9DB85 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rrp8Q9DB85 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rrp8Q9DB85 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Rrp8Q9DB85 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rrp8Q9DB85 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Rrp8Q9DB85 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms