Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Gm43482-201ENSMUST00000202797 1861 ntBASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Gm43186-201ENSMUST00000198130 824 ntBASIC12.79□□□□□ -0.36
Trim11Q99PQ2 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.79□□□□□ -0.36
Trim11Q99PQ2 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Gm15236-201ENSMUST00000117309 379 ntBASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Gm18367-201ENSMUST00000176139 600 ntBASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Gm29199-201ENSMUST00000187766 775 ntBASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Gm37284-201ENSMUST00000193607 539 ntBASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Gm37981-201ENSMUST00000194280 535 ntBASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.78□□□□□ -0.36
Trim11Q99PQ2 CT009764.1-201ENSMUST00000222260 483 ntBASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim11Q99PQ2 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim11Q99PQ2 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.77□□□□□ -0.36
Trim11Q99PQ2 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC12.77□□□□□ -0.36
Trim11Q99PQ2 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trim11Q99PQ2 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim11Q99PQ2 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms