Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Gm45199-201ENSMUST00000207640 1507 ntBASIC9.88□□□□□ -0.83
Scrt1Q99M85 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC9.88□□□□□ -0.83
Scrt1Q99M85 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Gm16167-201ENSMUST00000160428 1065 ntBASIC9.88□□□□□ -0.83
Scrt1Q99M85 Gm17214-201ENSMUST00000164501 541 ntBASIC9.88□□□□□ -0.83
Scrt1Q99M85 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Gm43671-201ENSMUST00000200422 433 ntBASIC9.88□□□□□ -0.83
Scrt1Q99M85 Gm6423-201ENSMUST00000204315 934 ntBASIC9.88□□□□□ -0.83
Scrt1Q99M85 Gm6855-201ENSMUST00000206307 790 ntBASIC9.88□□□□□ -0.83
Scrt1Q99M85 Gm45527-201ENSMUST00000211052 774 ntBASIC9.88□□□□□ -0.83
Scrt1Q99M85 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 AC158388.3-202ENSMUST00000225517 775 ntBASIC9.88□□□□□ -0.83
Scrt1Q99M85 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Scrt1Q99M85 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Gm43931-201ENSMUST00000204817 2870 ntBASIC9.88□□□□□ -0.83
Scrt1Q99M85 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Scrt1Q99M85 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Scrt1Q99M85 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Scrt1Q99M85 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC9.87□□□□□ -0.83
Scrt1Q99M85 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Scrt1Q99M85 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Scrt1Q99M85 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Scrt1Q99M85 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Scrt1Q99M85 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Scrt1Q99M85 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Scrt1Q99M85 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Scrt1Q99M85 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Scrt1Q99M85 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Scrt1Q99M85 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Scrt1Q99M85 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Scrt1Q99M85 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Scrt1Q99M85 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC9.87□□□□□ -0.83
Scrt1Q99M85 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Scrt1Q99M85 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Scrt1Q99M85 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Scrt1Q99M85 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC9.87□□□□□ -0.83
Scrt1Q99M85 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Scrt1Q99M85 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Scrt1Q99M85 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Scrt1Q99M85 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Scrt1Q99M85 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Scrt1Q99M85 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Scrt1Q99M85 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Scrt1Q99M85 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Scrt1Q99M85 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Scrt1Q99M85 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC9.87□□□□□ -0.83
Scrt1Q99M85 Gm6322-201ENSMUST00000118789 1004 ntBASIC9.87□□□□□ -0.83
Scrt1Q99M85 Gm13422-201ENSMUST00000118834 504 ntBASIC9.87□□□□□ -0.83
Scrt1Q99M85 Gm13445-201ENSMUST00000121664 307 ntBASIC9.87□□□□□ -0.83
Scrt1Q99M85 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Scrt1Q99M85 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC9.87□□□□□ -0.83
Scrt1Q99M85 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms