Protein–RNA interactions for Protein: Q99LG0

Usp16, Ubiquitin carboxyl-terminal hydrolase 16, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp16Q99LG0 Gm4753-201ENSMUST00000188327 1255 ntBASIC14.29□□□□□ -0.12
Usp16Q99LG0 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC14.29□□□□□ -0.12
Usp16Q99LG0 Gm6439-201ENSMUST00000199849 862 ntBASIC14.29□□□□□ -0.12
Usp16Q99LG0 Gm42655-201ENSMUST00000202782 1134 ntBASIC14.29□□□□□ -0.12
Usp16Q99LG0 Gm3793-201ENSMUST00000204973 672 ntBASIC14.29□□□□□ -0.12
Usp16Q99LG0 AC129308.3-201ENSMUST00000225652 524 ntBASIC14.29□□□□□ -0.12
Usp16Q99LG0 Gm9873-201ENSMUST00000063891 1097 ntBASIC14.29□□□□□ -0.12
Usp16Q99LG0 Gm16380-201ENSMUST00000077997 478 ntBASIC14.29□□□□□ -0.12
Usp16Q99LG0 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Usp16Q99LG0 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Usp16Q99LG0 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Usp16Q99LG0 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC14.29□□□□□ -0.12
Usp16Q99LG0 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp16Q99LG0 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC14.29□□□□□ -0.12
Usp16Q99LG0 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC14.29□□□□□ -0.12
Usp16Q99LG0 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp16Q99LG0 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp16Q99LG0 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Usp16Q99LG0 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp16Q99LG0 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp16Q99LG0 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Usp16Q99LG0 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Usp16Q99LG0 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp16Q99LG0 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp16Q99LG0 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp16Q99LG0 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp16Q99LG0 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp16Q99LG0 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp16Q99LG0 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp16Q99LG0 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp16Q99LG0 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp16Q99LG0 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Usp16Q99LG0 Gm14807-201ENSMUST00000116640 983 ntBASIC14.28□□□□□ -0.12
Usp16Q99LG0 Gm9673-201ENSMUST00000119287 781 ntBASIC14.28□□□□□ -0.12
Usp16Q99LG0 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Usp16Q99LG0 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC14.28□□□□□ -0.12
Usp16Q99LG0 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC14.28□□□□□ -0.12
Usp16Q99LG0 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC14.28□□□□□ -0.12
Usp16Q99LG0 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC14.28□□□□□ -0.12
Usp16Q99LG0 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC14.28□□□□□ -0.12
Usp16Q99LG0 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC14.28□□□□□ -0.12
Usp16Q99LG0 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp16Q99LG0 Gm8194-201ENSMUST00000159783 859 ntBASIC14.28□□□□□ -0.12
Usp16Q99LG0 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp16Q99LG0 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp16Q99LG0 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Usp16Q99LG0 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC14.28□□□□□ -0.12
Usp16Q99LG0 Gm5739-201ENSMUST00000208601 1703 ntBASIC14.28□□□□□ -0.12
Usp16Q99LG0 AC099645.1-201ENSMUST00000226476 1105 ntBASIC14.28□□□□□ -0.12
Usp16Q99LG0 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp16Q99LG0 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp16Q99LG0 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Usp16Q99LG0 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp16Q99LG0 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Usp16Q99LG0 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp16Q99LG0 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp16Q99LG0 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Usp16Q99LG0 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp16Q99LG0 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp16Q99LG0 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp16Q99LG0 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Usp16Q99LG0 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Usp16Q99LG0 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC14.27□□□□□ -0.12
Usp16Q99LG0 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Usp16Q99LG0 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Usp16Q99LG0 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp16Q99LG0 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp16Q99LG0 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp16Q99LG0 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC14.27□□□□□ -0.12
Usp16Q99LG0 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC14.27□□□□□ -0.12
Usp16Q99LG0 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC14.27□□□□□ -0.12
Usp16Q99LG0 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Usp16Q99LG0 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC14.27□□□□□ -0.13
Usp16Q99LG0 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC14.27□□□□□ -0.13
Usp16Q99LG0 Snord23-201ENSMUST00000116828 109 ntBASIC14.27□□□□□ -0.13
Usp16Q99LG0 Gm22379-201ENSMUST00000157480 131 ntBASIC14.27□□□□□ -0.13
Usp16Q99LG0 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC14.27□□□□□ -0.13
Usp16Q99LG0 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
Usp16Q99LG0 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp16Q99LG0 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC14.27□□□□□ -0.13
Usp16Q99LG0 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Usp16Q99LG0 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC14.27□□□□□ -0.13
Usp16Q99LG0 Gm9102-201ENSMUST00000219250 465 ntBASIC14.27□□□□□ -0.13
Usp16Q99LG0 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp16Q99LG0 AC129975.1-201ENSMUST00000224816 592 ntBASIC14.27□□□□□ -0.13
Usp16Q99LG0 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp16Q99LG0 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp16Q99LG0 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp16Q99LG0 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp16Q99LG0 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp16Q99LG0 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp16Q99LG0 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp16Q99LG0 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp16Q99LG0 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp16Q99LG0 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp16Q99LG0 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp16Q99LG0 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp16Q99LG0 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp16Q99LG0 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp16Q99LG0 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms