Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RtcbQ99LF4 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RtcbQ99LF4 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RtcbQ99LF4 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RtcbQ99LF4 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RtcbQ99LF4 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RtcbQ99LF4 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Gm23604-201ENSMUST00000104311 132 ntBASIC13.85□□□□□ -0.19
RtcbQ99LF4 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Gm8601-201ENSMUST00000182096 909 ntBASIC13.85□□□□□ -0.19
RtcbQ99LF4 Gm5210-201ENSMUST00000182150 1010 ntBASIC13.85□□□□□ -0.19
RtcbQ99LF4 Gm27316-201ENSMUST00000184884 277 ntBASIC13.85□□□□□ -0.19
RtcbQ99LF4 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
RtcbQ99LF4 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.85□□□□□ -0.19
RtcbQ99LF4 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Gm3836-201ENSMUST00000211377 1613 ntBASIC13.85□□□□□ -0.19
RtcbQ99LF4 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RtcbQ99LF4 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RtcbQ99LF4 Gm42858-201ENSMUST00000202512 1704 ntBASIC13.84□□□□□ -0.19
RtcbQ99LF4 Gm5739-201ENSMUST00000208601 1703 ntBASIC13.84□□□□□ -0.19
RtcbQ99LF4 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RtcbQ99LF4 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RtcbQ99LF4 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RtcbQ99LF4 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
RtcbQ99LF4 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RtcbQ99LF4 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RtcbQ99LF4 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RtcbQ99LF4 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.84□□□□□ -0.19
RtcbQ99LF4 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RtcbQ99LF4 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RtcbQ99LF4 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RtcbQ99LF4 Gm15746-201ENSMUST00000120684 1027 ntBASIC13.84□□□□□ -0.19
RtcbQ99LF4 Gm16288-201ENSMUST00000137940 367 ntBASIC13.84□□□□□ -0.19
RtcbQ99LF4 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RtcbQ99LF4 Gm23582-201ENSMUST00000158530 139 ntBASIC13.84□□□□□ -0.19
RtcbQ99LF4 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC13.84□□□□□ -0.19
RtcbQ99LF4 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC13.84□□□□□ -0.19
RtcbQ99LF4 Gm7928-201ENSMUST00000181249 701 ntBASIC13.84□□□□□ -0.19
RtcbQ99LF4 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RtcbQ99LF4 AC103672.1-201ENSMUST00000227502 365 ntBASIC13.84□□□□□ -0.19
RtcbQ99LF4 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RtcbQ99LF4 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RtcbQ99LF4 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RtcbQ99LF4 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RtcbQ99LF4 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RtcbQ99LF4 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RtcbQ99LF4 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RtcbQ99LF4 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
RtcbQ99LF4 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
RtcbQ99LF4 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RtcbQ99LF4 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
RtcbQ99LF4 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RtcbQ99LF4 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.84□□□□□ -0.19
RtcbQ99LF4 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RtcbQ99LF4 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RtcbQ99LF4 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RtcbQ99LF4 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
RtcbQ99LF4 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
RtcbQ99LF4 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
RtcbQ99LF4 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
RtcbQ99LF4 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
RtcbQ99LF4 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
RtcbQ99LF4 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.83□□□□□ -0.19
RtcbQ99LF4 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RtcbQ99LF4 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
RtcbQ99LF4 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RtcbQ99LF4 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.83□□□□□ -0.2
RtcbQ99LF4 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RtcbQ99LF4 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RtcbQ99LF4 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RtcbQ99LF4 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms