Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Gm15625-201ENSMUST00000117617 1093 ntBASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Gm6758-201ENSMUST00000119643 1055 ntBASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Gm5909-201ENSMUST00000119768 1281 ntBASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Gm25604-201ENSMUST00000158359 133 ntBASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Gm7880-201ENSMUST00000203748 871 ntBASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 AC154407.1-201ENSMUST00000226777 526 ntBASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Gm26782-203ENSMUST00000227103 751 ntBASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Btrc-209ENSMUST00000224478 2194 ntBASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Gm42941-201ENSMUST00000200347 1321 ntBASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Smarcd2Q99JR8 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
Smarcd2Q99JR8 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Gm11380-201ENSMUST00000118067 560 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Gm14113-201ENSMUST00000121399 976 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Gm18733-202ENSMUST00000174447 401 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Gm23647-201ENSMUST00000175042 109 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Rn5s-201ENSMUST00000177555 119 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 n-R5s108-201ENSMUST00000177575 119 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 n-R5s121-201ENSMUST00000177589 119 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 n-R5s146-201ENSMUST00000177889 119 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Gm22109-201ENSMUST00000177995 119 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Gm22291-201ENSMUST00000178027 119 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 n-R5s141-201ENSMUST00000178066 119 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Gm23284-201ENSMUST00000178069 119 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 n-R5s100-201ENSMUST00000178106 119 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 n-R5s111-201ENSMUST00000178203 119 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 n-R5s105-201ENSMUST00000178499 119 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 n-R5s149-201ENSMUST00000178520 119 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 n-R5s103-201ENSMUST00000178755 119 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 n-R5s123-201ENSMUST00000178804 119 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 n-R5s142-201ENSMUST00000178820 119 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 n-R5s144-201ENSMUST00000178859 119 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 n-R5s139-201ENSMUST00000178975 119 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 n-R5s134-201ENSMUST00000178983 119 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 n-R5s136-201ENSMUST00000179080 119 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Gm25018-201ENSMUST00000179081 119 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 n-R5s104-201ENSMUST00000179107 119 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 n-R5s113-201ENSMUST00000179143 119 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 n-R5s133-201ENSMUST00000179275 119 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 n-R5s117-201ENSMUST00000179431 119 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 Gm25212-201ENSMUST00000179432 119 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 n-R5s138-201ENSMUST00000179476 119 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 n-R5s122-201ENSMUST00000179500 119 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 n-R5s143-201ENSMUST00000179542 119 ntBASIC11.33□□□□□ -0.6
Smarcd2Q99JR8 n-R5s107-201ENSMUST00000179704 119 ntBASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms