Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim60Q8VI40 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trim60Q8VI40 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim60Q8VI40 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Trim60Q8VI40 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim60Q8VI40 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trim60Q8VI40 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trim60Q8VI40 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim60Q8VI40 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trim60Q8VI40 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Gm15808-201ENSMUST00000119046 604 ntBASIC11.59□□□□□ -0.55
Trim60Q8VI40 Gm8199-201ENSMUST00000121323 823 ntBASIC11.59□□□□□ -0.55
Trim60Q8VI40 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Gm7741-201ENSMUST00000181445 989 ntBASIC11.59□□□□□ -0.55
Trim60Q8VI40 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.59□□□□□ -0.55
Trim60Q8VI40 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.59□□□□□ -0.55
Trim60Q8VI40 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.59□□□□□ -0.55
Trim60Q8VI40 Gm43058-201ENSMUST00000197645 625 ntBASIC11.59□□□□□ -0.55
Trim60Q8VI40 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.59□□□□□ -0.55
Trim60Q8VI40 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC11.59□□□□□ -0.55
Trim60Q8VI40 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Trim60Q8VI40 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Trim60Q8VI40 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Trim60Q8VI40 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Trim60Q8VI40 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim60Q8VI40 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim60Q8VI40 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trim60Q8VI40 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim60Q8VI40 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.58□□□□□ -0.56
Trim60Q8VI40 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim60Q8VI40 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim60Q8VI40 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim60Q8VI40 Gm12266-201ENSMUST00000120311 962 ntBASIC11.58□□□□□ -0.56
Trim60Q8VI40 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.58□□□□□ -0.56
Trim60Q8VI40 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.58□□□□□ -0.56
Trim60Q8VI40 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim60Q8VI40 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.58□□□□□ -0.56
Trim60Q8VI40 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.58□□□□□ -0.56
Trim60Q8VI40 Gm27530-201ENSMUST00000184096 98 ntBASIC11.58□□□□□ -0.56
Trim60Q8VI40 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.58□□□□□ -0.56
Trim60Q8VI40 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim60Q8VI40 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim60Q8VI40 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.58□□□□□ -0.56
Trim60Q8VI40 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.58□□□□□ -0.56
Trim60Q8VI40 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim60Q8VI40 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.58□□□□□ -0.56
Trim60Q8VI40 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.58□□□□□ -0.56
Trim60Q8VI40 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim60Q8VI40 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trim60Q8VI40 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms