Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Tex21-202ENSMUST00000218426 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Ces1f-201ENSMUST00000034178 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Tmem30c-203ENSMUST00000120112 3478 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Gm10804-201ENSMUST00000099693 2244 ntTSL 2 BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Gm22133-201ENSMUST00000102082 109 ntBASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Gm23061-201ENSMUST00000102348 116 ntBASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Gm15824-201ENSMUST00000119516 955 ntBASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Gm7150-201ENSMUST00000122032 981 ntBASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Gm20495-201ENSMUST00000173902 235 ntBASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Gm27046-201ENSMUST00000182160 463 ntBASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Gm4157-201ENSMUST00000211647 679 ntBASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Stpg2-201ENSMUST00000062306 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Ccdc28bQ8CEG5 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc28bQ8CEG5 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms