Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Alx1Q8C8B0 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Alx1Q8C8B0 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Alx1Q8C8B0 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Alx1Q8C8B0 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC13.04□□□□□ -0.32
Alx1Q8C8B0 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Alx1Q8C8B0 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Alx1Q8C8B0 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC13.04□□□□□ -0.32
Alx1Q8C8B0 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC13.04□□□□□ -0.32
Alx1Q8C8B0 Gm5944-201ENSMUST00000118182 1001 ntBASIC13.04□□□□□ -0.32
Alx1Q8C8B0 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Alx1Q8C8B0 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC13.04□□□□□ -0.32
Alx1Q8C8B0 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC13.04□□□□□ -0.32
Alx1Q8C8B0 Mipep-ps-201ENSMUST00000177439 291 ntBASIC13.04□□□□□ -0.32
Alx1Q8C8B0 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC13.04□□□□□ -0.32
Alx1Q8C8B0 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC13.04□□□□□ -0.32
Alx1Q8C8B0 AC129308.3-201ENSMUST00000225652 524 ntBASIC13.04□□□□□ -0.32
Alx1Q8C8B0 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Alx1Q8C8B0 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Alx1Q8C8B0 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Alx1Q8C8B0 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Alx1Q8C8B0 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Alx1Q8C8B0 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Alx1Q8C8B0 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Alx1Q8C8B0 Gm19027-201ENSMUST00000187291 1355 ntBASIC13.04□□□□□ -0.32
Alx1Q8C8B0 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC13.04□□□□□ -0.32
Alx1Q8C8B0 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Alx1Q8C8B0 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Alx1Q8C8B0 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Alx1Q8C8B0 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Alx1Q8C8B0 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Alx1Q8C8B0 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC13.04□□□□□ -0.32
Alx1Q8C8B0 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Gm22379-201ENSMUST00000157480 131 ntBASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Gm42655-201ENSMUST00000202782 1134 ntBASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Gm7082-201ENSMUST00000209880 969 ntBASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 AC132901.1-201ENSMUST00000224345 508 ntBASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Alx1Q8C8B0 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Alx1Q8C8B0 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Alx1Q8C8B0 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Alx1Q8C8B0 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Alx1Q8C8B0 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Alx1Q8C8B0 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.02□□□□□ -0.32
Alx1Q8C8B0 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Alx1Q8C8B0 Gm25053-201ENSMUST00000103982 133 ntBASIC13.02□□□□□ -0.33
Alx1Q8C8B0 Gm25922-201ENSMUST00000104281 130 ntBASIC13.02□□□□□ -0.33
Alx1Q8C8B0 Gm25562-201ENSMUST00000104608 133 ntBASIC13.02□□□□□ -0.33
Alx1Q8C8B0 Gm13668-201ENSMUST00000119237 1001 ntBASIC13.02□□□□□ -0.33
Alx1Q8C8B0 Gm14497-201ENSMUST00000119537 580 ntBASIC13.02□□□□□ -0.33
Alx1Q8C8B0 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC13.02□□□□□ -0.33
Alx1Q8C8B0 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC13.02□□□□□ -0.33
Alx1Q8C8B0 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Alx1Q8C8B0 Gm24679-201ENSMUST00000158762 111 ntBASIC13.02□□□□□ -0.33
Alx1Q8C8B0 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC13.02□□□□□ -0.33
Alx1Q8C8B0 Gm25072-201ENSMUST00000175233 235 ntBASIC13.02□□□□□ -0.33
Alx1Q8C8B0 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC13.02□□□□□ -0.33
Alx1Q8C8B0 Gm25053-202ENSMUST00000199731 132 ntBASIC13.02□□□□□ -0.33
Alx1Q8C8B0 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC13.02□□□□□ -0.33
Alx1Q8C8B0 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Alx1Q8C8B0 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Alx1Q8C8B0 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Alx1Q8C8B0 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Alx1Q8C8B0 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC13.02□□□□□ -0.33
Alx1Q8C8B0 Gfra2-203ENSMUST00000227697 1323 ntBASIC13.02□□□□□ -0.33
Alx1Q8C8B0 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Alx1Q8C8B0 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Alx1Q8C8B0 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC13.02□□□□□ -0.33
Alx1Q8C8B0 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 122.5 ms