Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Ube2q1-202ENSMUST00000196726 1650 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim35Q8C006 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim35Q8C006 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim35Q8C006 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim35Q8C006 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim35Q8C006 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trim35Q8C006 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim35Q8C006 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.94□□□□□ -0.34
Trim35Q8C006 Gm13226-201ENSMUST00000117838 404 ntBASIC12.94□□□□□ -0.34
Trim35Q8C006 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.94□□□□□ -0.34
Trim35Q8C006 Gm11425-201ENSMUST00000119608 498 ntBASIC12.94□□□□□ -0.34
Trim35Q8C006 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.94□□□□□ -0.34
Trim35Q8C006 Klra11-ps-201ENSMUST00000122033 810 ntBASIC12.94□□□□□ -0.34
Trim35Q8C006 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.94□□□□□ -0.34
Trim35Q8C006 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim35Q8C006 Gm24644-201ENSMUST00000157114 139 ntBASIC12.94□□□□□ -0.34
Trim35Q8C006 Mir1982-201ENSMUST00000157368 74 ntBASIC12.94□□□□□ -0.34
Trim35Q8C006 Gm16300-201ENSMUST00000160031 1279 ntBASIC12.94□□□□□ -0.34
Trim35Q8C006 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.94□□□□□ -0.34
Trim35Q8C006 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim35Q8C006 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trim35Q8C006 Gm25284-201ENSMUST00000180345 141 ntBASIC12.94□□□□□ -0.34
Trim35Q8C006 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC12.94□□□□□ -0.34
Trim35Q8C006 AY702102-202ENSMUST00000194651 1173 ntBASIC12.94□□□□□ -0.34
Trim35Q8C006 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim35Q8C006 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim35Q8C006 Gm19931-201ENSMUST00000198920 368 ntBASIC12.94□□□□□ -0.34
Trim35Q8C006 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.94□□□□□ -0.34
Trim35Q8C006 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.94□□□□□ -0.34
Trim35Q8C006 Gm7239-201ENSMUST00000220981 860 ntBASIC12.94□□□□□ -0.34
Trim35Q8C006 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trim35Q8C006 CT030166.1-201ENSMUST00000222654 357 ntBASIC12.94□□□□□ -0.34
Trim35Q8C006 AC136376.1-201ENSMUST00000228496 950 ntBASIC12.94□□□□□ -0.34
Trim35Q8C006 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trim35Q8C006 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.94□□□□□ -0.34
Trim35Q8C006 Gm6776-201ENSMUST00000057752 900 ntBASIC12.94□□□□□ -0.34
Trim35Q8C006 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim35Q8C006 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trim35Q8C006 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trim35Q8C006 Gm9396-201ENSMUST00000076703 567 ntBASIC12.94□□□□□ -0.34
Trim35Q8C006 Gm24150-201ENSMUST00000082759 104 ntBASIC12.94□□□□□ -0.34
Trim35Q8C006 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC12.94□□□□□ -0.34
Trim35Q8C006 Olfr582-201ENSMUST00000098212 960 ntBASIC12.94□□□□□ -0.34
Trim35Q8C006 Gm43410-201ENSMUST00000197510 2234 ntBASIC12.94□□□□□ -0.34
Trim35Q8C006 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim35Q8C006 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim35Q8C006 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim35Q8C006 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim35Q8C006 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim35Q8C006 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim35Q8C006 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim35Q8C006 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim35Q8C006 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trim35Q8C006 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim35Q8C006 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim35Q8C006 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim35Q8C006 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.94□□□□□ -0.34
Trim35Q8C006 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim35Q8C006 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim35Q8C006 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim35Q8C006 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim35Q8C006 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim35Q8C006 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim35Q8C006 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.93□□□□□ -0.34
Trim35Q8C006 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim35Q8C006 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC12.93□□□□□ -0.34
Trim35Q8C006 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim35Q8C006 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim35Q8C006 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trim35Q8C006 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim35Q8C006 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim35Q8C006 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim35Q8C006 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim35Q8C006 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.93□□□□□ -0.34
Trim35Q8C006 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim35Q8C006 AC154575.1-201ENSMUST00000227166 1474 ntBASIC12.93□□□□□ -0.34
Trim35Q8C006 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim35Q8C006 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim35Q8C006 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim35Q8C006 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim35Q8C006 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim35Q8C006 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim35Q8C006 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trim35Q8C006 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim35Q8C006 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim35Q8C006 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.93□□□□□ -0.34
Trim35Q8C006 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Trim35Q8C006 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim35Q8C006 Gm14621-201ENSMUST00000117709 689 ntBASIC12.93□□□□□ -0.34
Trim35Q8C006 Gm4993-201ENSMUST00000118719 1174 ntBASIC12.93□□□□□ -0.34
Trim35Q8C006 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim35Q8C006 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC12.93□□□□□ -0.34
Trim35Q8C006 Gm14176-201ENSMUST00000121302 477 ntBASIC12.93□□□□□ -0.34
Trim35Q8C006 Gm5931-201ENSMUST00000121308 477 ntBASIC12.93□□□□□ -0.34
Trim35Q8C006 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC12.93□□□□□ -0.34
Trim35Q8C006 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim35Q8C006 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim35Q8C006 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.93□□□□□ -0.34
Trim35Q8C006 Gm29513-201ENSMUST00000185741 202 ntBASIC12.93□□□□□ -0.34
Trim35Q8C006 Gm7654-201ENSMUST00000186738 683 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms