Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Mt1-202ENSMUST00000211807 1085 ntBASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Gm45856-201ENSMUST00000212752 416 ntBASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Gm30671-201ENSMUST00000214898 318 ntBASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh8Q7TSK3 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Gm22379-201ENSMUST00000157480 131 ntBASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 CT030653.1-201ENSMUST00000224382 1279 ntBASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms