Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Gm28196-201ENSMUST00000187719 640 ntBASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Gm7046-201ENSMUST00000221351 977 ntBASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Sfi1-218ENSMUST00000153425 3759 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Arhgap17-203ENSMUST00000167309 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Rorc-201ENSMUST00000029795 2136 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Sh2d3c-201ENSMUST00000074248 3092 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Wdr78-201ENSMUST00000036451 3671 ntTSL 5 BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Gm43633-201ENSMUST00000202455 2330 ntBASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Slc13a4-201ENSMUST00000031868 3427 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Fgfr1-213ENSMUST00000167764 2915 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Fbxl12-206ENSMUST00000148631 3756 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 Ascc2-201ENSMUST00000070257 2650 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf220Q6PDX6 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Cpt1b-201ENSMUST00000109313 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Tm4sf1-201ENSMUST00000029376 1436 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Gm38005-201ENSMUST00000194845 2745 ntBASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Zbtb8b-201ENSMUST00000053042 3288 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Gm25214-201ENSMUST00000104573 129 ntBASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Gm5187-201ENSMUST00000117317 991 ntBASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Gm11531-201ENSMUST00000117614 555 ntBASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Gm11793-201ENSMUST00000120433 981 ntBASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Gm13786-201ENSMUST00000122371 333 ntBASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Gm18187-201ENSMUST00000196476 984 ntBASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Park2-209ENSMUST00000191124 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Gm45336-201ENSMUST00000210010 3230 ntTSL 5 BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Slc2a4rg-ps-201ENSMUST00000127559 2976 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Hdac7-208ENSMUST00000121514 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf220Q6PDX6 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Myadm-201ENSMUST00000096744 2814 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms