Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.11□□□□□ -0.31
Smarcc2Q6PDG5 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcc2Q6PDG5 Gm37299-201ENSMUST00000193951 826 ntBASIC13.11□□□□□ -0.31
Smarcc2Q6PDG5 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcc2Q6PDG5 Gm6430-201ENSMUST00000054664 1248 ntBASIC13.11□□□□□ -0.31
Smarcc2Q6PDG5 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcc2Q6PDG5 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcc2Q6PDG5 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcc2Q6PDG5 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC13.11□□□□□ -0.31
Smarcc2Q6PDG5 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC13.11□□□□□ -0.31
Smarcc2Q6PDG5 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcc2Q6PDG5 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcc2Q6PDG5 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcc2Q6PDG5 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcc2Q6PDG5 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcc2Q6PDG5 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Smarcc2Q6PDG5 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC13.11□□□□□ -0.31
Smarcc2Q6PDG5 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Smarcc2Q6PDG5 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Gm25076-201ENSMUST00000104098 132 ntBASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Gm11667-201ENSMUST00000119828 486 ntBASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Gm3551-201ENSMUST00000190750 664 ntBASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Gm29067-201ENSMUST00000190821 470 ntBASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Gm44315-201ENSMUST00000203041 219 ntBASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 CT485607.1-201ENSMUST00000216100 85 ntBASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 CT009546.1-201ENSMUST00000222573 1120 ntBASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 AC154257.1-202ENSMUST00000224729 843 ntBASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC13.1□□□□□ -0.31
Smarcc2Q6PDG5 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Gm44415-201ENSMUST00000204151 2112 ntBASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Gm15528-201ENSMUST00000117821 864 ntBASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Gm16166-201ENSMUST00000118291 787 ntBASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Gm16071-201ENSMUST00000119589 793 ntBASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Gm8876-201ENSMUST00000120768 1122 ntBASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Gm10731-201ENSMUST00000181171 448 ntBASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Gm17826-201ENSMUST00000189720 798 ntBASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 AC149588.2-201ENSMUST00000228182 1859 ntBASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Snora73b-201ENSMUST00000083419 205 ntBASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc2Q6PDG5 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms