Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Gm22334-201ENSMUST00000158070 133 ntBASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Gm17391-201ENSMUST00000171036 126 ntBASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Gm3551-201ENSMUST00000190750 664 ntBASIC11.38□□□□□ -0.59
Casc4Q6P2L7 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Gm9645-201ENSMUST00000197131 792 ntBASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Gm45856-201ENSMUST00000212752 416 ntBASIC11.38□□□□□ -0.59
Casc4Q6P2L7 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.38□□□□□ -0.59
Casc4Q6P2L7 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 CT009713.5-203ENSMUST00000224218 2079 ntBASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Gm22846-201ENSMUST00000157706 270 ntBASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Gm5523-201ENSMUST00000180415 997 ntBASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Gm44126-201ENSMUST00000204831 514 ntBASIC11.37□□□□□ -0.59
Casc4Q6P2L7 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Gm10179-201ENSMUST00000086233 688 ntBASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Casc4Q6P2L7 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Casc4Q6P2L7 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Casc4Q6P2L7 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Casc4Q6P2L7 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.36□□□□□ -0.59
Casc4Q6P2L7 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Casc4Q6P2L7 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Casc4Q6P2L7 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Casc4Q6P2L7 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.36□□□□□ -0.59
Casc4Q6P2L7 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Casc4Q6P2L7 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Casc4Q6P2L7 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Casc4Q6P2L7 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.36□□□□□ -0.59
Casc4Q6P2L7 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Casc4Q6P2L7 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Casc4Q6P2L7 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.36□□□□□ -0.59
Casc4Q6P2L7 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Casc4Q6P2L7 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Casc4Q6P2L7 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Casc4Q6P2L7 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Casc4Q6P2L7 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Casc4Q6P2L7 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms