Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Wfdc11-201ENSMUST00000109332 617 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Wfdc11-202ENSMUST00000167694 249 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Gm26726-201ENSMUST00000181889 395 ntTSL 3 BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 AC164883.7-201ENSMUST00000228534 851 ntBASIC5.7□□□□□ -1.5
Ush2AQ2QI47 n-R5s74-201ENSMUST00000082654 116 ntBASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Arg2-201ENSMUST00000021550 1428 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 AC122811.1-201ENSMUST00000222257 2921 ntBASIC5.7□□□□□ -1.5
Ush2AQ2QI47 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Timp1-202ENSMUST00000115342 883 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Gm11824-201ENSMUST00000120191 846 ntBASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Gm12124-201ENSMUST00000120504 679 ntBASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Gm11662-201ENSMUST00000121389 1193 ntBASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Gm37264-201ENSMUST00000194916 2192 ntBASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Gm2939-201ENSMUST00000198496 478 ntBASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Gm42654-201ENSMUST00000200789 494 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Gm44033-201ENSMUST00000203699 695 ntBASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Gm43242-201ENSMUST00000199507 1776 ntBASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Gm22777-201ENSMUST00000104091 129 ntBASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Ap5s1-202ENSMUST00000110206 703 ntTSL 3 BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Rhox4a-201ENSMUST00000115194 925 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Gm12248-201ENSMUST00000137124 933 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Pcsk2os1-202ENSMUST00000156780 527 ntTSL 3 BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Gm25082-201ENSMUST00000177296 255 ntBASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Gm45014-201ENSMUST00000207657 405 ntTSL 3 BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Gm33882-201ENSMUST00000208990 651 ntBASIC5.69□□□□□ -1.5
Ush2AQ2QI47 AC153864.1-201ENSMUST00000218482 523 ntBASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Rpl19-ps2-201ENSMUST00000219540 590 ntBASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Olfr685-201ENSMUST00000051355 1088 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Gm35722-201ENSMUST00000218270 1625 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Gm8684-201ENSMUST00000195078 1564 ntBASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Asb5-201ENSMUST00000033918 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Gm43102-201ENSMUST00000201004 2324 ntBASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 H2-M10.4-201ENSMUST00000057502 1410 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Gm13021-201ENSMUST00000135716 407 ntTSL 5 BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Gm22667-201ENSMUST00000158718 328 ntBASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Gm22009-201ENSMUST00000158792 343 ntBASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Gm37825-201ENSMUST00000193141 904 ntTSL 5 BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Shisa5-204ENSMUST00000196954 843 ntTSL 3 BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 CT025679.1-201ENSMUST00000227106 449 ntBASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Papolg-202ENSMUST00000102863 2171 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Mir467f-201ENSMUST00000116923 120 ntBASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Olfr122-201ENSMUST00000119082 993 ntBASIC5.69□□□□□ -1.5
Ush2AQ2QI47 2410021H03Rik-201ENSMUST00000187090 764 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Snap25-201ENSMUST00000028727 2116 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 AC124392.1-201ENSMUST00000225172 5324 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms