Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
Npas1P97459 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Npas1P97459 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
Npas1P97459 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Npas1P97459 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC9.4□□□□□ -0.9
Npas1P97459 4933414I15Rik-201ENSMUST00000109123 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Npas1P97459 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.91
Npas1P97459 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.91
Npas1P97459 Slc12a6-204ENSMUST00000110991 4556 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Npas1P97459 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Npas1P97459 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Npas1P97459 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.91
Npas1P97459 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Npas1P97459 Slc14a2-201ENSMUST00000025434 2793 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Npas1P97459 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Npas1P97459 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Npas1P97459 Apobr-201ENSMUST00000039522 3685 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Npas1P97459 Pantr1-208ENSMUST00000181660 2085 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Npas1P97459 Gm35715-201ENSMUST00000197421 2054 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Npas1P97459 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Npas1P97459 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 Stau1-202ENSMUST00000109235 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 Parp1-201ENSMUST00000027777 3873 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Npas1P97459 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Npas1P97459 Gm42460-201ENSMUST00000198863 2567 ntBASIC9.39□□□□□ -0.91
Npas1P97459 Dis3l2-202ENSMUST00000168237 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 Traf1-207ENSMUST00000172159 3436 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Npas1P97459 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 Nit1-201ENSMUST00000111289 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 Gm14644-201ENSMUST00000116671 647 ntBASIC9.39□□□□□ -0.91
Npas1P97459 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC9.39□□□□□ -0.91
Npas1P97459 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 Gm9034-201ENSMUST00000182071 1005 ntBASIC9.39□□□□□ -0.91
Npas1P97459 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC9.39□□□□□ -0.91
Npas1P97459 Gm4607-201ENSMUST00000206649 577 ntBASIC9.39□□□□□ -0.91
Npas1P97459 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Npas1P97459 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC9.39□□□□□ -0.91
Npas1P97459 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC9.39□□□□□ -0.91
Npas1P97459 AC154222.2-201ENSMUST00000225848 607 ntBASIC9.39□□□□□ -0.91
Npas1P97459 Morn2-202ENSMUST00000227729 656 ntBASIC9.39□□□□□ -0.91
Npas1P97459 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Npas1P97459 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC9.39□□□□□ -0.91
Npas1P97459 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC9.39□□□□□ -0.91
Npas1P97459 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 AC173482.6-201ENSMUST00000225889 1741 ntBASIC9.39□□□□□ -0.91
Npas1P97459 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 Cd160-203ENSMUST00000165991 2458 ntAPPRIS ALT2 TSL 3 BASIC9.39□□□□□ -0.91
Npas1P97459 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Npas1P97459 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Npas1P97459 Olfr1199-204ENSMUST00000213138 2657 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Npas1P97459 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Npas1P97459 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC9.38□□□□□ -0.91
Npas1P97459 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Npas1P97459 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Npas1P97459 Man1b1-201ENSMUST00000042390 3755 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Npas1P97459 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Npas1P97459 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Npas1P97459 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Npas1P97459 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Npas1P97459 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Npas1P97459 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Npas1P97459 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Npas1P97459 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Npas1P97459 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Npas1P97459 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Npas1P97459 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC9.38□□□□□ -0.91
Npas1P97459 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Npas1P97459 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Npas1P97459 Gm38002-201ENSMUST00000193255 180 ntBASIC9.38□□□□□ -0.91
Npas1P97459 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Npas1P97459 Gm6013-201ENSMUST00000212264 699 ntBASIC9.38□□□□□ -0.91
Npas1P97459 AC130829.1-201ENSMUST00000221548 494 ntBASIC9.38□□□□□ -0.91
Npas1P97459 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Npas1P97459 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Npas1P97459 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Npas1P97459 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms