Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cacna1aP97445 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cacna1aP97445 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC10.41□□□□□ -0.74
Cacna1aP97445 Gm23439-201ENSMUST00000104292 132 ntBASIC10.4□□□□□ -0.74
Cacna1aP97445 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cacna1aP97445 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cacna1aP97445 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC10.4□□□□□ -0.74
Cacna1aP97445 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Cacna1aP97445 Zcwpw2-203ENSMUST00000187803 372 ntBASIC10.4□□□□□ -0.74
Cacna1aP97445 Gm20781-201ENSMUST00000193154 693 ntBASIC10.4□□□□□ -0.74
Cacna1aP97445 Gm21736-201ENSMUST00000195399 693 ntBASIC10.4□□□□□ -0.74
Cacna1aP97445 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC10.4□□□□□ -0.74
Cacna1aP97445 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.4□□□□□ -0.74
Cacna1aP97445 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cacna1aP97445 AC115304.2-201ENSMUST00000226399 332 ntBASIC10.4□□□□□ -0.74
Cacna1aP97445 Gm26782-203ENSMUST00000227103 751 ntBASIC10.4□□□□□ -0.74
Cacna1aP97445 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cacna1aP97445 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cacna1aP97445 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Cacna1aP97445 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cacna1aP97445 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cacna1aP97445 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cacna1aP97445 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cacna1aP97445 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cacna1aP97445 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Cacna1aP97445 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cacna1aP97445 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cacna1aP97445 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.4□□□□□ -0.74
Cacna1aP97445 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cacna1aP97445 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cacna1aP97445 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cacna1aP97445 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cacna1aP97445 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cacna1aP97445 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Cacna1aP97445 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cacna1aP97445 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cacna1aP97445 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Cacna1aP97445 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cacna1aP97445 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cacna1aP97445 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cacna1aP97445 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cacna1aP97445 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Cacna1aP97445 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Cacna1aP97445 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC10.4□□□□□ -0.74
Cacna1aP97445 Defa-ps16-201ENSMUST00000121939 171 ntBASIC10.4□□□□□ -0.74
Cacna1aP97445 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cacna1aP97445 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC10.4□□□□□ -0.74
Cacna1aP97445 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.4□□□□□ -0.74
Cacna1aP97445 Gm6612-201ENSMUST00000170777 395 ntBASIC10.4□□□□□ -0.74
Cacna1aP97445 Gm18014-201ENSMUST00000183369 817 ntBASIC10.4□□□□□ -0.74
Cacna1aP97445 Gm29543-201ENSMUST00000188138 967 ntBASIC10.4□□□□□ -0.74
Cacna1aP97445 Gm44124-201ENSMUST00000204159 472 ntBASIC10.4□□□□□ -0.74
Cacna1aP97445 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cacna1aP97445 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.4□□□□□ -0.74
Cacna1aP97445 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cacna1aP97445 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cacna1aP97445 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cacna1aP97445 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC10.4□□□□□ -0.74
Cacna1aP97445 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Cacna1aP97445 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cacna1aP97445 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC10.4□□□□□ -0.75
Cacna1aP97445 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Cacna1aP97445 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.75
Cacna1aP97445 Ntrk2-209ENSMUST00000225950 2640 ntBASIC10.4□□□□□ -0.75
Cacna1aP97445 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cacna1aP97445 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cacna1aP97445 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cacna1aP97445 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Cacna1aP97445 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Cacna1aP97445 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cacna1aP97445 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cacna1aP97445 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cacna1aP97445 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cacna1aP97445 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cacna1aP97445 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC10.39□□□□□ -0.75
Cacna1aP97445 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC10.39□□□□□ -0.75
Cacna1aP97445 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Cacna1aP97445 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC10.39□□□□□ -0.75
Cacna1aP97445 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.39□□□□□ -0.75
Cacna1aP97445 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC10.39□□□□□ -0.75
Cacna1aP97445 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cacna1aP97445 Olfml3-204ENSMUST00000169286 874 ntBASIC10.39□□□□□ -0.75
Cacna1aP97445 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC10.39□□□□□ -0.75
Cacna1aP97445 Gm7815-201ENSMUST00000196104 832 ntBASIC10.39□□□□□ -0.75
Cacna1aP97445 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cacna1aP97445 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cacna1aP97445 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cacna1aP97445 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Cacna1aP97445 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cacna1aP97445 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cacna1aP97445 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cacna1aP97445 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cacna1aP97445 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cacna1aP97445 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cacna1aP97445 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cacna1aP97445 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cacna1aP97445 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cacna1aP97445 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cacna1aP97445 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cacna1aP97445 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 173.5 ms