Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.09□□□□□ -0.79
SgcbP82349 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SgcbP82349 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
SgcbP82349 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
SgcbP82349 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SgcbP82349 Gm21358-201ENSMUST00000191645 1659 ntBASIC10.09□□□□□ -0.79
SgcbP82349 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
SgcbP82349 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SgcbP82349 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
SgcbP82349 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SgcbP82349 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
SgcbP82349 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
SgcbP82349 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.08□□□□□ -0.8
SgcbP82349 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SgcbP82349 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SgcbP82349 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SgcbP82349 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
SgcbP82349 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SgcbP82349 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SgcbP82349 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SgcbP82349 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
SgcbP82349 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
SgcbP82349 Gm4294-201ENSMUST00000105169 614 ntBASIC10.08□□□□□ -0.8
SgcbP82349 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC10.08□□□□□ -0.8
SgcbP82349 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC10.08□□□□□ -0.8
SgcbP82349 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC10.08□□□□□ -0.8
SgcbP82349 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SgcbP82349 Gm16071-201ENSMUST00000119589 793 ntBASIC10.08□□□□□ -0.8
SgcbP82349 Gm14942-201ENSMUST00000119642 336 ntBASIC10.08□□□□□ -0.8
SgcbP82349 Gm16219-201ENSMUST00000120096 274 ntBASIC10.08□□□□□ -0.8
SgcbP82349 Gm12516-201ENSMUST00000120819 385 ntBASIC10.08□□□□□ -0.8
SgcbP82349 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC10.08□□□□□ -0.8
SgcbP82349 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SgcbP82349 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SgcbP82349 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
SgcbP82349 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
SgcbP82349 Gm3344-201ENSMUST00000169610 603 ntBASIC10.08□□□□□ -0.8
SgcbP82349 Gm25026-201ENSMUST00000175017 188 ntBASIC10.08□□□□□ -0.8
SgcbP82349 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
SgcbP82349 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
SgcbP82349 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
SgcbP82349 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
SgcbP82349 Gm23694-201ENSMUST00000179335 110 ntBASIC10.08□□□□□ -0.8
SgcbP82349 Gm17826-201ENSMUST00000189720 798 ntBASIC10.08□□□□□ -0.8
SgcbP82349 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC10.08□□□□□ -0.8
SgcbP82349 Gm17877-201ENSMUST00000192578 814 ntBASIC10.08□□□□□ -0.8
SgcbP82349 Gm37826-201ENSMUST00000195329 322 ntBASIC10.08□□□□□ -0.8
SgcbP82349 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
SgcbP82349 Gm43124-201ENSMUST00000201878 278 ntBASIC10.08□□□□□ -0.8
SgcbP82349 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SgcbP82349 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SgcbP82349 Gm5051-201ENSMUST00000204085 485 ntBASIC10.08□□□□□ -0.8
SgcbP82349 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC10.08□□□□□ -0.8
SgcbP82349 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SgcbP82349 CT025561.1-201ENSMUST00000214972 674 ntBASIC10.08□□□□□ -0.8
SgcbP82349 Gm39375-201ENSMUST00000217068 1039 ntTSL 5 BASIC10.08□□□□□ -0.8
SgcbP82349 CT009718.3-201ENSMUST00000221116 367 ntBASIC10.08□□□□□ -0.8
SgcbP82349 Gm19189-201ENSMUST00000221689 754 ntBASIC10.08□□□□□ -0.8
SgcbP82349 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
SgcbP82349 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SgcbP82349 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
SgcbP82349 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
SgcbP82349 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SgcbP82349 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SgcbP82349 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SgcbP82349 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SgcbP82349 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SgcbP82349 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SgcbP82349 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SgcbP82349 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SgcbP82349 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
SgcbP82349 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
SgcbP82349 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
SgcbP82349 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
SgcbP82349 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
SgcbP82349 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
SgcbP82349 Gm29644-201ENSMUST00000189003 1341 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
SgcbP82349 Gm42995-201ENSMUST00000197047 1330 ntBASIC10.07□□□□□ -0.8
SgcbP82349 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.07□□□□□ -0.8
SgcbP82349 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 AC154806.5-202ENSMUST00000227217 1443 ntBASIC10.07□□□□□ -0.8
SgcbP82349 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
SgcbP82349 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.07□□□□□ -0.8
SgcbP82349 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
SgcbP82349 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.07□□□□□ -0.8
SgcbP82349 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
SgcbP82349 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms