Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
CiitaP79621 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
CiitaP79621 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CiitaP79621 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CiitaP79621 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CiitaP79621 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CiitaP79621 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CiitaP79621 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
CiitaP79621 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CiitaP79621 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CiitaP79621 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
CiitaP79621 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
CiitaP79621 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CiitaP79621 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CiitaP79621 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CiitaP79621 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CiitaP79621 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CiitaP79621 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CiitaP79621 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC12.15□□□□□ -0.46
CiitaP79621 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CiitaP79621 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
CiitaP79621 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC12.15□□□□□ -0.46
CiitaP79621 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CiitaP79621 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
CiitaP79621 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.15□□□□□ -0.46
CiitaP79621 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CiitaP79621 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CiitaP79621 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
CiitaP79621 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
CiitaP79621 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
CiitaP79621 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC12.15□□□□□ -0.46
CiitaP79621 Gm12389-201ENSMUST00000117696 418 ntBASIC12.15□□□□□ -0.46
CiitaP79621 Gm16397-201ENSMUST00000122201 494 ntBASIC12.15□□□□□ -0.46
CiitaP79621 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC12.15□□□□□ -0.46
CiitaP79621 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CiitaP79621 Gm16165-201ENSMUST00000160140 795 ntBASIC12.15□□□□□ -0.46
CiitaP79621 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC12.15□□□□□ -0.46
CiitaP79621 Gm44814-201ENSMUST00000207018 434 ntBASIC12.15□□□□□ -0.46
CiitaP79621 Gm45120-201ENSMUST00000208880 408 ntBASIC12.15□□□□□ -0.46
CiitaP79621 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
CiitaP79621 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC12.15□□□□□ -0.46
CiitaP79621 AC115304.2-201ENSMUST00000226399 332 ntBASIC12.15□□□□□ -0.46
CiitaP79621 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CiitaP79621 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
CiitaP79621 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CiitaP79621 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CiitaP79621 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CiitaP79621 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CiitaP79621 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.15□□□□□ -0.46
CiitaP79621 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CiitaP79621 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
CiitaP79621 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CiitaP79621 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CiitaP79621 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CiitaP79621 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
CiitaP79621 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.47
CiitaP79621 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CiitaP79621 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CiitaP79621 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CiitaP79621 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
CiitaP79621 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.14□□□□□ -0.47
CiitaP79621 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CiitaP79621 Gm43334-201ENSMUST00000197740 1318 ntBASIC12.14□□□□□ -0.47
CiitaP79621 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
CiitaP79621 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CiitaP79621 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CiitaP79621 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
CiitaP79621 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CiitaP79621 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
CiitaP79621 Gm25562-201ENSMUST00000104608 133 ntBASIC12.14□□□□□ -0.47
CiitaP79621 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CiitaP79621 Gm12986-201ENSMUST00000119037 967 ntBASIC12.14□□□□□ -0.47
CiitaP79621 Gm11952-201ENSMUST00000121172 821 ntBASIC12.14□□□□□ -0.47
CiitaP79621 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CiitaP79621 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CiitaP79621 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CiitaP79621 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CiitaP79621 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.14□□□□□ -0.47
CiitaP79621 Gm18059-201ENSMUST00000208073 580 ntBASIC12.14□□□□□ -0.47
CiitaP79621 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CiitaP79621 AC129975.1-201ENSMUST00000224816 592 ntBASIC12.14□□□□□ -0.47
CiitaP79621 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CiitaP79621 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CiitaP79621 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CiitaP79621 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CiitaP79621 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CiitaP79621 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.14□□□□□ -0.47
CiitaP79621 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CiitaP79621 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CiitaP79621 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.14□□□□□ -0.47
CiitaP79621 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CiitaP79621 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CiitaP79621 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.14□□□□□ -0.47
CiitaP79621 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CiitaP79621 Gm42815-201ENSMUST00000198787 1470 ntBASIC12.14□□□□□ -0.47
CiitaP79621 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
CiitaP79621 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CiitaP79621 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CiitaP79621 Gm44106-201ENSMUST00000203153 1599 ntBASIC12.13□□□□□ -0.47
CiitaP79621 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms