Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm3P62311 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Lsm3P62311 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Lsm3P62311 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm3P62311 Il12rb2-201ENSMUST00000018485 2998 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm3P62311 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC10.12□□□□□ -0.79
Lsm3P62311 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC10.12□□□□□ -0.79
Lsm3P62311 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.12□□□□□ -0.79
Lsm3P62311 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Lsm3P62311 Gm45124-201ENSMUST00000206723 2755 ntBASIC10.12□□□□□ -0.79
Lsm3P62311 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm3P62311 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Lsm3P62311 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm3P62311 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Lsm3P62311 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Lsm3P62311 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm3P62311 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.12□□□□□ -0.79
Lsm3P62311 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.12□□□□□ -0.79
Lsm3P62311 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.12□□□□□ -0.79
Lsm3P62311 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.12□□□□□ -0.79
Lsm3P62311 Gm27892-201ENSMUST00000185017 106 ntBASIC10.12□□□□□ -0.79
Lsm3P62311 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm3P62311 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.12□□□□□ -0.79
Lsm3P62311 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.12□□□□□ -0.79
Lsm3P62311 Gm37935-201ENSMUST00000192012 982 ntBASIC10.12□□□□□ -0.79
Lsm3P62311 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm3P62311 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.12□□□□□ -0.79
Lsm3P62311 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.12□□□□□ -0.79
Lsm3P62311 AC135669.1-201ENSMUST00000213585 412 ntBASIC10.12□□□□□ -0.79
Lsm3P62311 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm3P62311 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC10.12□□□□□ -0.79
Lsm3P62311 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.12□□□□□ -0.79
Lsm3P62311 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm3P62311 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm3P62311 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm3P62311 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
Lsm3P62311 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm3P62311 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Lsm3P62311 2900060N12Rik-201ENSMUST00000221412 3721 ntBASIC10.12□□□□□ -0.79
Lsm3P62311 Thsd7b-201ENSMUST00000040311 3895 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm3P62311 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm3P62311 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm3P62311 5830462I19Rik-201ENSMUST00000168137 3383 ntBASIC10.12□□□□□ -0.79
Lsm3P62311 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm3P62311 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm3P62311 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.12□□□□□ -0.79
Lsm3P62311 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm3P62311 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm3P62311 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm3P62311 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm3P62311 Gm26614-201ENSMUST00000180386 3909 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm3P62311 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm3P62311 P4ha1-201ENSMUST00000009789 4043 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm3P62311 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm3P62311 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm3P62311 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm3P62311 Gm3372-201ENSMUST00000198806 1792 ntBASIC10.11□□□□□ -0.79
Lsm3P62311 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm3P62311 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.11□□□□□ -0.79
Lsm3P62311 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm3P62311 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm3P62311 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC10.11□□□□□ -0.79
Lsm3P62311 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC10.11□□□□□ -0.79
Lsm3P62311 9630001P10Rik-201ENSMUST00000181083 2799 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm3P62311 Fadd-201ENSMUST00000033394 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm3P62311 Fbxl12-206ENSMUST00000148631 3756 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm3P62311 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Lsm3P62311 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Lsm3P62311 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm3P62311 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Lsm3P62311 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm3P62311 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm3P62311 Gm11989-201ENSMUST00000117240 672 ntBASIC10.11□□□□□ -0.79
Lsm3P62311 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
Lsm3P62311 Gm11362-201ENSMUST00000118838 850 ntBASIC10.11□□□□□ -0.79
Lsm3P62311 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC10.11□□□□□ -0.79
Lsm3P62311 Gm16177-201ENSMUST00000120728 718 ntBASIC10.11□□□□□ -0.79
Lsm3P62311 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm3P62311 Gm13316-201ENSMUST00000140537 691 ntBASIC10.11□□□□□ -0.79
Lsm3P62311 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm3P62311 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.11□□□□□ -0.79
Lsm3P62311 Gm23984-201ENSMUST00000157139 203 ntBASIC10.11□□□□□ -0.79
Lsm3P62311 Cul2-206ENSMUST00000162301 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm3P62311 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.11□□□□□ -0.79
Lsm3P62311 Gm2546-201ENSMUST00000182630 991 ntBASIC10.11□□□□□ -0.79
Lsm3P62311 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.11□□□□□ -0.79
Lsm3P62311 Gm28937-201ENSMUST00000185413 695 ntBASIC10.11□□□□□ -0.79
Lsm3P62311 Gm29400-201ENSMUST00000187208 695 ntBASIC10.11□□□□□ -0.79
Lsm3P62311 Gm28662-201ENSMUST00000188446 695 ntBASIC10.11□□□□□ -0.79
Lsm3P62311 Gm28251-201ENSMUST00000188835 695 ntBASIC10.11□□□□□ -0.79
Lsm3P62311 Gm37318-201ENSMUST00000194325 695 ntBASIC10.11□□□□□ -0.79
Lsm3P62311 Gm38017-201ENSMUST00000194768 695 ntBASIC10.11□□□□□ -0.79
Lsm3P62311 Gm37287-201ENSMUST00000195449 695 ntBASIC10.11□□□□□ -0.79
Lsm3P62311 Gm37793-201ENSMUST00000195548 695 ntBASIC10.11□□□□□ -0.79
Lsm3P62311 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm3P62311 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm3P62311 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Lsm3P62311 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm3P62311 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC10.11□□□□□ -0.79
Lsm3P62311 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms