Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Rrp1P56183 Gm15329-201ENSMUST00000121408 155 ntBASIC12.63□□□□□ -0.39
Rrp1P56183 Gm15549-201ENSMUST00000121595 622 ntBASIC12.63□□□□□ -0.39
Rrp1P56183 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.63□□□□□ -0.39
Rrp1P56183 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rrp1P56183 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.63□□□□□ -0.39
Rrp1P56183 Gm38321-201ENSMUST00000195053 235 ntBASIC12.63□□□□□ -0.39
Rrp1P56183 Gm7504-201ENSMUST00000201449 424 ntBASIC12.63□□□□□ -0.39
Rrp1P56183 Gm8342-201ENSMUST00000209839 757 ntBASIC12.63□□□□□ -0.39
Rrp1P56183 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.63□□□□□ -0.39
Rrp1P56183 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rrp1P56183 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rrp1P56183 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rrp1P56183 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rrp1P56183 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.63□□□□□ -0.39
Rrp1P56183 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rrp1P56183 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rrp1P56183 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.63□□□□□ -0.39
Rrp1P56183 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.63□□□□□ -0.39
Rrp1P56183 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rrp1P56183 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rrp1P56183 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rrp1P56183 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.62□□□□□ -0.39
Rrp1P56183 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp1P56183 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp1P56183 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp1P56183 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp1P56183 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp1P56183 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp1P56183 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rrp1P56183 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC12.62□□□□□ -0.39
Rrp1P56183 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp1P56183 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp1P56183 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rrp1P56183 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp1P56183 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp1P56183 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp1P56183 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Rrp1P56183 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp1P56183 Gm8199-201ENSMUST00000121323 823 ntBASIC12.62□□□□□ -0.39
Rrp1P56183 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.62□□□□□ -0.39
Rrp1P56183 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.62□□□□□ -0.39
Rrp1P56183 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.62□□□□□ -0.39
Rrp1P56183 Gm27341-201ENSMUST00000183570 106 ntBASIC12.62□□□□□ -0.39
Rrp1P56183 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.62□□□□□ -0.39
Rrp1P56183 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.62□□□□□ -0.39
Rrp1P56183 Gm43058-201ENSMUST00000197645 625 ntBASIC12.62□□□□□ -0.39
Rrp1P56183 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.62□□□□□ -0.39
Rrp1P56183 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp1P56183 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp1P56183 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp1P56183 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC12.62□□□□□ -0.39
Rrp1P56183 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp1P56183 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rrp1P56183 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp1P56183 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp1P56183 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp1P56183 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp1P56183 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.62□□□□□ -0.39
Rrp1P56183 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC12.62□□□□□ -0.39
Rrp1P56183 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp1P56183 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp1P56183 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp1P56183 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp1P56183 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp1P56183 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp1P56183 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.62□□□□□ -0.39
Rrp1P56183 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp1P56183 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rrp1P56183 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp1P56183 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp1P56183 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp1P56183 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC12.61□□□□□ -0.39
Rrp1P56183 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp1P56183 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.61□□□□□ -0.39
Rrp1P56183 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp1P56183 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp1P56183 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp1P56183 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Rrp1P56183 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp1P56183 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp1P56183 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.61□□□□□ -0.39
Rrp1P56183 Gm8731-201ENSMUST00000118088 412 ntBASIC12.61□□□□□ -0.39
Rrp1P56183 Gm13461-201ENSMUST00000120980 662 ntBASIC12.61□□□□□ -0.39
Rrp1P56183 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Rrp1P56183 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.61□□□□□ -0.39
Rrp1P56183 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp1P56183 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.61□□□□□ -0.39
Rrp1P56183 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.61□□□□□ -0.39
Rrp1P56183 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp1P56183 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.61□□□□□ -0.39
Rrp1P56183 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp1P56183 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.61□□□□□ -0.39
Rrp1P56183 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp1P56183 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rrp1P56183 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp1P56183 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp1P56183 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp1P56183 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp1P56183 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms