Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HttP42859 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HttP42859 Adh1-201ENSMUST00000004232 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HttP42859 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HttP42859 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HttP42859 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HttP42859 Pde7a-203ENSMUST00000121951 382 ntTSL 3 BASIC11.51□□□□□ -0.57
HttP42859 Gm26619-201ENSMUST00000180396 1073 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HttP42859 Gm44700-201ENSMUST00000208228 846 ntTSL 3 BASIC11.51□□□□□ -0.57
HttP42859 AC139579.1-201ENSMUST00000214560 606 ntTSL 3 BASIC11.51□□□□□ -0.57
HttP42859 AC160109.1-201ENSMUST00000225592 729 ntBASIC11.51□□□□□ -0.57
HttP42859 Olfr1511-201ENSMUST00000078171 957 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
HttP42859 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HttP42859 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HttP42859 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HttP42859 Ppp6c-205ENSMUST00000204701 1495 ntTSL 5 BASIC11.51□□□□□ -0.57
HttP42859 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HttP42859 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.51□□□□□ -0.57
HttP42859 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HttP42859 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HttP42859 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HttP42859 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
HttP42859 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
HttP42859 Gm6727-201ENSMUST00000204102 1518 ntBASIC11.51□□□□□ -0.57
HttP42859 Dcdc5-203ENSMUST00000126340 396 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HttP42859 5730420D15Rik-201ENSMUST00000181781 1182 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HttP42859 Gm43761-201ENSMUST00000202132 991 ntBASIC11.51□□□□□ -0.57
HttP42859 Gm40723-201ENSMUST00000219407 603 ntTSL 3 BASIC11.51□□□□□ -0.57
HttP42859 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HttP42859 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
HttP42859 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
HttP42859 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.5□□□□□ -0.57
HttP42859 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC11.5□□□□□ -0.57
HttP42859 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC11.5□□□□□ -0.57
HttP42859 Gm29266-201ENSMUST00000190392 600 ntTSL 3 BASIC11.5□□□□□ -0.57
HttP42859 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.5□□□□□ -0.57
HttP42859 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.5□□□□□ -0.57
HttP42859 Gm29803-201ENSMUST00000205069 375 ntBASIC11.5□□□□□ -0.57
HttP42859 Gm7664-201ENSMUST00000221988 745 ntBASIC11.5□□□□□ -0.57
HttP42859 AC134860.5-201ENSMUST00000225071 1249 ntBASIC11.5□□□□□ -0.57
HttP42859 H2al1m-201ENSMUST00000073949 535 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
HttP42859 Mgst2-201ENSMUST00000099106 603 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HttP42859 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HttP42859 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HttP42859 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
HttP42859 Sectm1a-201ENSMUST00000026162 1692 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
HttP42859 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
HttP42859 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
HttP42859 4833420G17Rik-201ENSMUST00000026519 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HttP42859 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HttP42859 Gm24981-201ENSMUST00000104459 132 ntBASIC11.5□□□□□ -0.57
HttP42859 Gm9434-201ENSMUST00000118975 813 ntBASIC11.5□□□□□ -0.57
HttP42859 Gm11520-201ENSMUST00000122837 630 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HttP42859 Gm9458-201ENSMUST00000135273 727 ntBASIC11.5□□□□□ -0.57
HttP42859 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HttP42859 Mipep-ps-201ENSMUST00000177439 291 ntBASIC11.5□□□□□ -0.57
HttP42859 Gm7160-201ENSMUST00000185535 471 ntTSL 2 BASIC11.5□□□□□ -0.57
HttP42859 Gm45846-201ENSMUST00000211170 446 ntTSL 2 BASIC11.5□□□□□ -0.57
HttP42859 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HttP42859 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HttP42859 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HttP42859 Gm37264-201ENSMUST00000194916 2192 ntBASIC11.5□□□□□ -0.57
HttP42859 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
HttP42859 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HttP42859 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
HttP42859 Nbdy-204ENSMUST00000185492 1346 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
HttP42859 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HttP42859 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
HttP42859 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
HttP42859 Gm12529-201ENSMUST00000119529 268 ntBASIC11.49□□□□□ -0.57
HttP42859 Samd13-201ENSMUST00000124931 905 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
HttP42859 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HttP42859 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
HttP42859 Arpp19-207ENSMUST00000169188 216 ntTSL 5 BASIC11.49□□□□□ -0.57
HttP42859 Gm28381-201ENSMUST00000188403 193 ntBASIC11.49□□□□□ -0.57
HttP42859 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HttP42859 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HttP42859 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
HttP42859 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HttP42859 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.49□□□□□ -0.57
HttP42859 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HttP42859 Myo1h-209ENSMUST00000199567 1307 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
HttP42859 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HttP42859 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
HttP42859 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HttP42859 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
HttP42859 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HttP42859 Gm19114-201ENSMUST00000193972 1357 ntBASIC11.49□□□□□ -0.57
HttP42859 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
HttP42859 Maats1os-201ENSMUST00000133496 326 ntTSL 3 BASIC11.49□□□□□ -0.57
HttP42859 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC11.49□□□□□ -0.57
HttP42859 Gm5801-201ENSMUST00000182247 780 ntBASIC11.49□□□□□ -0.57
HttP42859 Gm35696-202ENSMUST00000220364 778 ntTSL 5 BASIC11.49□□□□□ -0.57
HttP42859 AC112259.1-201ENSMUST00000222891 853 ntTSL 2 BASIC11.49□□□□□ -0.57
HttP42859 AC160931.1-201ENSMUST00000223298 413 ntTSL 3 BASIC11.49□□□□□ -0.57
HttP42859 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC11.49□□□□□ -0.57
HttP42859 Gm45076-201ENSMUST00000207517 1517 ntTSL 5 BASIC11.49□□□□□ -0.57
HttP42859 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.49□□□□□ -0.57
HttP42859 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
HttP42859 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms