Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Nkx2-2P42586 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Gm8197-202ENSMUST00000193422 934 ntBASIC10.26□□□□□ -0.77
Nkx2-2P42586 Gm43520-201ENSMUST00000197996 164 ntBASIC10.26□□□□□ -0.77
Nkx2-2P42586 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Gm5599-201ENSMUST00000209602 788 ntBASIC10.26□□□□□ -0.77
Nkx2-2P42586 Gm8959-201ENSMUST00000213150 571 ntBASIC10.26□□□□□ -0.77
Nkx2-2P42586 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC10.26□□□□□ -0.77
Nkx2-2P42586 AC153505.1-201ENSMUST00000218819 1071 ntBASIC10.26□□□□□ -0.77
Nkx2-2P42586 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC10.26□□□□□ -0.77
Nkx2-2P42586 AC154589.2-201ENSMUST00000228847 251 ntBASIC10.26□□□□□ -0.77
Nkx2-2P42586 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Gm8899-201ENSMUST00000214635 1332 ntBASIC10.26□□□□□ -0.77
Nkx2-2P42586 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC10.26□□□□□ -0.77
Nkx2-2P42586 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC10.26□□□□□ -0.77
Nkx2-2P42586 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.25□□□□□ -0.77
Nkx2-2P42586 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Gm5739-201ENSMUST00000208601 1703 ntBASIC10.25□□□□□ -0.77
Nkx2-2P42586 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Nkx2-2P42586 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-2P42586 AC124732.3-201ENSMUST00000221835 1765 ntBASIC10.25□□□□□ -0.77
Nkx2-2P42586 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC10.25□□□□□ -0.77
Nkx2-2P42586 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Gm19015-201ENSMUST00000184002 1189 ntBASIC10.25□□□□□ -0.77
Nkx2-2P42586 Gm4753-201ENSMUST00000188327 1255 ntBASIC10.25□□□□□ -0.77
Nkx2-2P42586 Gm43163-201ENSMUST00000196571 442 ntBASIC10.25□□□□□ -0.77
Nkx2-2P42586 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Gm42997-202ENSMUST00000200321 985 ntBASIC10.25□□□□□ -0.77
Nkx2-2P42586 Gm18753-201ENSMUST00000201000 566 ntBASIC10.25□□□□□ -0.77
Nkx2-2P42586 Gm45118-201ENSMUST00000208928 825 ntBASIC10.25□□□□□ -0.77
Nkx2-2P42586 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Gm9661-201ENSMUST00000221611 1122 ntBASIC10.25□□□□□ -0.77
Nkx2-2P42586 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-2P42586 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC10.25□□□□□ -0.77
Nkx2-2P42586 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-2P42586 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms