Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC16.45■□□□□ 0.22
Chd1P40201 Gm29003-202ENSMUST00000190434 453 ntTSL 5 BASIC16.45■□□□□ 0.22
Chd1P40201 Gm28313-201ENSMUST00000191411 397 ntTSL 5 BASIC16.45■□□□□ 0.22
Chd1P40201 Gm35670-201ENSMUST00000192493 397 ntTSL 5 BASIC16.45■□□□□ 0.22
Chd1P40201 Gm37656-201ENSMUST00000192673 397 ntTSL 5 BASIC16.45■□□□□ 0.22
Chd1P40201 Gm37561-201ENSMUST00000195221 368 ntTSL 5 BASIC16.45■□□□□ 0.22
Chd1P40201 Gm43066-201ENSMUST00000199589 1260 ntBASIC16.45■□□□□ 0.22
Chd1P40201 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd1P40201 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Chd1P40201 Tmem212-201ENSMUST00000058077 716 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd1P40201 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd1P40201 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Chd1P40201 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd1P40201 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd1P40201 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd1P40201 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.44■□□□□ 0.22
Chd1P40201 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd1P40201 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd1P40201 Bpifb1-201ENSMUST00000028987 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd1P40201 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd1P40201 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd1P40201 Dcdc5-203ENSMUST00000126340 396 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Chd1P40201 Gm15888-201ENSMUST00000154016 538 ntTSL 2 BASIC16.44■□□□□ 0.22
Chd1P40201 Gm16560-201ENSMUST00000159115 404 ntBASIC16.44■□□□□ 0.22
Chd1P40201 Ighv1-11-201ENSMUST00000191801 351 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Chd1P40201 AC160929.1-201ENSMUST00000221247 415 ntBASIC16.44■□□□□ 0.22
Chd1P40201 AC129590.1-201ENSMUST00000225573 852 ntBASIC16.44■□□□□ 0.22
Chd1P40201 AC242269.1-201ENSMUST00000227020 741 ntBASIC16.44■□□□□ 0.22
Chd1P40201 n-R5s5-201ENSMUST00000083134 119 ntBASIC16.44■□□□□ 0.22
Chd1P40201 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd1P40201 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Chd1P40201 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd1P40201 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Chd1P40201 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd1P40201 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd1P40201 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chd1P40201 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd1P40201 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Chd1P40201 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd1P40201 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chd1P40201 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd1P40201 Katnal2-203ENSMUST00000123650 638 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chd1P40201 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC16.43■□□□□ 0.22
Chd1P40201 Gm16008-203ENSMUST00000181389 480 ntTSL 3 BASIC16.43■□□□□ 0.22
Chd1P40201 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chd1P40201 Gm37622-201ENSMUST00000192162 285 ntTSL 5 BASIC16.43■□□□□ 0.22
Chd1P40201 Gm38191-201ENSMUST00000194509 770 ntTSL 5 BASIC16.43■□□□□ 0.22
Chd1P40201 Gm7924-201ENSMUST00000203975 785 ntBASIC16.43■□□□□ 0.22
Chd1P40201 Calb2-202ENSMUST00000212297 1080 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chd1P40201 AC140426.1-201ENSMUST00000227933 459 ntBASIC16.43■□□□□ 0.22
Chd1P40201 Mgst2-201ENSMUST00000099106 603 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd1P40201 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Chd1P40201 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd1P40201 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd1P40201 Gm7823-201ENSMUST00000120761 1623 ntBASIC16.43■□□□□ 0.22
Chd1P40201 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chd1P40201 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd1P40201 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd1P40201 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd1P40201 Gm21917-203ENSMUST00000180309 561 ntTSL 3 BASIC16.42■□□□□ 0.22
Chd1P40201 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1P40201 Zfp572-201ENSMUST00000183674 1098 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1P40201 Ighv5-10-201ENSMUST00000194591 252 ntBASIC16.42■□□□□ 0.22
Chd1P40201 Gm45780-201ENSMUST00000212089 224 ntBASIC16.42■□□□□ 0.22
Chd1P40201 AC134860.5-201ENSMUST00000225071 1249 ntBASIC16.42■□□□□ 0.22
Chd1P40201 Fibp-201ENSMUST00000025847 1215 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1P40201 Eif3m-201ENSMUST00000028592 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1P40201 Olfr418-201ENSMUST00000059754 991 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Chd1P40201 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1P40201 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1P40201 Gm14858-201ENSMUST00000138614 1758 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1P40201 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Chd1P40201 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1P40201 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1P40201 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1P40201 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.42■□□□□ 0.22
Chd1P40201 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1P40201 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1P40201 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Chd1P40201 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Chd1P40201 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1P40201 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC16.42■□□□□ 0.22
Chd1P40201 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1P40201 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1P40201 Polr1c-203ENSMUST00000124655 829 ntTSL 5 BASIC16.42■□□□□ 0.22
Chd1P40201 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Chd1P40201 1700069L16Rik-201ENSMUST00000047891 537 ntAPPRIS P5 TSL 2 BASIC16.42■□□□□ 0.22
Chd1P40201 Pla2g2a-201ENSMUST00000077582 784 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Chd1P40201 Mypopos-202ENSMUST00000205975 2321 ntBASIC16.42■□□□□ 0.22
Chd1P40201 AU015228-201ENSMUST00000121103 1320 ntBASIC16.42■□□□□ 0.22
Chd1P40201 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1P40201 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Chd1P40201 D030068K23Rik-203ENSMUST00000181098 1399 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chd1P40201 AC167022.1-201ENSMUST00000218647 1458 ntBASIC16.41■□□□□ 0.22
Chd1P40201 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chd1P40201 Gm45076-201ENSMUST00000207517 1517 ntTSL 5 BASIC16.41■□□□□ 0.22
Chd1P40201 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd1P40201 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd1P40201 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Chd1P40201 Gm45170-201ENSMUST00000206746 1671 ntBASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms