Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nfkb1P25799 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nfkb1P25799 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.57□□□□□ -0.56
Nfkb1P25799 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Nfkb1P25799 Gm4993-201ENSMUST00000118719 1174 ntBASIC11.57□□□□□ -0.56
Nfkb1P25799 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nfkb1P25799 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.57□□□□□ -0.56
Nfkb1P25799 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC11.57□□□□□ -0.56
Nfkb1P25799 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.57□□□□□ -0.56
Nfkb1P25799 Gm9081-201ENSMUST00000182346 991 ntBASIC11.57□□□□□ -0.56
Nfkb1P25799 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.57□□□□□ -0.56
Nfkb1P25799 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nfkb1P25799 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.57□□□□□ -0.56
Nfkb1P25799 Gm7082-201ENSMUST00000209880 969 ntBASIC11.57□□□□□ -0.56
Nfkb1P25799 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC11.57□□□□□ -0.56
Nfkb1P25799 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Nfkb1P25799 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nfkb1P25799 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Nfkb1P25799 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nfkb1P25799 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.57□□□□□ -0.56
Nfkb1P25799 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Nfkb1P25799 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nfkb1P25799 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nfkb1P25799 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nfkb1P25799 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nfkb1P25799 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.57□□□□□ -0.56
Nfkb1P25799 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nfkb1P25799 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nfkb1P25799 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nfkb1P25799 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nfkb1P25799 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nfkb1P25799 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nfkb1P25799 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nfkb1P25799 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Nfkb1P25799 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nfkb1P25799 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nfkb1P25799 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nfkb1P25799 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nfkb1P25799 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nfkb1P25799 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nfkb1P25799 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nfkb1P25799 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC11.56□□□□□ -0.56
Nfkb1P25799 Gm9133-201ENSMUST00000118289 540 ntBASIC11.56□□□□□ -0.56
Nfkb1P25799 Gm11340-201ENSMUST00000119226 412 ntBASIC11.56□□□□□ -0.56
Nfkb1P25799 Gm9673-201ENSMUST00000119287 781 ntBASIC11.56□□□□□ -0.56
Nfkb1P25799 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nfkb1P25799 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nfkb1P25799 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC11.56□□□□□ -0.56
Nfkb1P25799 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC11.56□□□□□ -0.56
Nfkb1P25799 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nfkb1P25799 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.56□□□□□ -0.56
Nfkb1P25799 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.56□□□□□ -0.56
Nfkb1P25799 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.56□□□□□ -0.56
Nfkb1P25799 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.56□□□□□ -0.56
Nfkb1P25799 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC11.56□□□□□ -0.56
Nfkb1P25799 Gm30946-201ENSMUST00000198288 724 ntBASIC11.56□□□□□ -0.56
Nfkb1P25799 Gm43671-201ENSMUST00000200422 433 ntBASIC11.56□□□□□ -0.56
Nfkb1P25799 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.56□□□□□ -0.56
Nfkb1P25799 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC11.56□□□□□ -0.56
Nfkb1P25799 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.56□□□□□ -0.56
Nfkb1P25799 AC154305.2-201ENSMUST00000225813 901 ntBASIC11.56□□□□□ -0.56
Nfkb1P25799 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nfkb1P25799 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Nfkb1P25799 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.56□□□□□ -0.56
Nfkb1P25799 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nfkb1P25799 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.56□□□□□ -0.56
Nfkb1P25799 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nfkb1P25799 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nfkb1P25799 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.56□□□□□ -0.56
Nfkb1P25799 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nfkb1P25799 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nfkb1P25799 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nfkb1P25799 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Nfkb1P25799 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nfkb1P25799 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nfkb1P25799 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nfkb1P25799 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nfkb1P25799 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nfkb1P25799 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nfkb1P25799 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nfkb1P25799 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.55□□□□□ -0.56
Nfkb1P25799 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
Nfkb1P25799 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Nfkb1P25799 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Nfkb1P25799 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Nfkb1P25799 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Nfkb1P25799 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.55□□□□□ -0.56
Nfkb1P25799 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 Gm37744-201ENSMUST00000194616 1590 ntBASIC11.55□□□□□ -0.56
Nfkb1P25799 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms