Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hcn1O88704 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hcn1O88704 AC122408.1-201ENSMUST00000218949 218 ntBASIC10.77□□□□□ -0.69
Hcn1O88704 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hcn1O88704 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Hcn1O88704 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Hcn1O88704 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
Hcn1O88704 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hcn1O88704 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC10.77□□□□□ -0.69
Hcn1O88704 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hcn1O88704 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hcn1O88704 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hcn1O88704 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Hcn1O88704 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
Hcn1O88704 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hcn1O88704 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.77□□□□□ -0.69
Hcn1O88704 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Hcn1O88704 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
Hcn1O88704 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hcn1O88704 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hcn1O88704 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hcn1O88704 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Hcn1O88704 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hcn1O88704 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.76□□□□□ -0.69
Hcn1O88704 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Hcn1O88704 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hcn1O88704 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hcn1O88704 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.76□□□□□ -0.69
Hcn1O88704 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Hcn1O88704 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hcn1O88704 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hcn1O88704 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hcn1O88704 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hcn1O88704 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
Hcn1O88704 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hcn1O88704 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hcn1O88704 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Hcn1O88704 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hcn1O88704 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hcn1O88704 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.76□□□□□ -0.69
Hcn1O88704 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Hcn1O88704 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hcn1O88704 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC10.76□□□□□ -0.69
Hcn1O88704 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC10.76□□□□□ -0.69
Hcn1O88704 Gm26047-201ENSMUST00000157308 113 ntBASIC10.76□□□□□ -0.69
Hcn1O88704 Gm22902-201ENSMUST00000158488 302 ntBASIC10.76□□□□□ -0.69
Hcn1O88704 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hcn1O88704 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.76□□□□□ -0.69
Hcn1O88704 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hcn1O88704 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hcn1O88704 Mir6546-201ENSMUST00000184460 62 ntBASIC10.76□□□□□ -0.69
Hcn1O88704 Mir8093-201ENSMUST00000185043 137 ntBASIC10.76□□□□□ -0.69
Hcn1O88704 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.76□□□□□ -0.69
Hcn1O88704 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC10.76□□□□□ -0.69
Hcn1O88704 Gm5982-201ENSMUST00000196234 512 ntBASIC10.76□□□□□ -0.69
Hcn1O88704 Gm26047-202ENSMUST00000198840 115 ntBASIC10.76□□□□□ -0.69
Hcn1O88704 Gm6108-201ENSMUST00000208365 367 ntBASIC10.76□□□□□ -0.69
Hcn1O88704 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC10.76□□□□□ -0.69
Hcn1O88704 AC154290.1-201ENSMUST00000223786 1240 ntBASIC10.76□□□□□ -0.69
Hcn1O88704 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hcn1O88704 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hcn1O88704 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Hcn1O88704 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hcn1O88704 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hcn1O88704 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hcn1O88704 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hcn1O88704 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hcn1O88704 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC10.76□□□□□ -0.69
Hcn1O88704 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Hcn1O88704 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.76□□□□□ -0.69
Hcn1O88704 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hcn1O88704 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hcn1O88704 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hcn1O88704 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Hcn1O88704 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hcn1O88704 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Hcn1O88704 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.75□□□□□ -0.69
Hcn1O88704 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hcn1O88704 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hcn1O88704 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Hcn1O88704 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hcn1O88704 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Hcn1O88704 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Hcn1O88704 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hcn1O88704 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Hcn1O88704 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Hcn1O88704 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Hcn1O88704 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.75□□□□□ -0.69
Hcn1O88704 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hcn1O88704 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Hcn1O88704 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.75□□□□□ -0.69
Hcn1O88704 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Hcn1O88704 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Hcn1O88704 Gm11700-201ENSMUST00000119409 403 ntBASIC10.75□□□□□ -0.69
Hcn1O88704 Mup-ps26-201ENSMUST00000121751 202 ntBASIC10.75□□□□□ -0.69
Hcn1O88704 Gm7666-201ENSMUST00000146631 819 ntBASIC10.75□□□□□ -0.69
Hcn1O88704 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Hcn1O88704 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.75□□□□□ -0.69
Hcn1O88704 Gm22144-201ENSMUST00000157402 102 ntBASIC10.75□□□□□ -0.69
Hcn1O88704 Gm3150-201ENSMUST00000166418 204 ntBASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms