Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syce3B5KM66 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syce3B5KM66 Gm45675-201ENSMUST00000211202 3429 ntBASIC12.75□□□□□ -0.37
Syce3B5KM66 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syce3B5KM66 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Syce3B5KM66 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.75□□□□□ -0.37
Syce3B5KM66 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.75□□□□□ -0.37
Syce3B5KM66 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.75□□□□□ -0.37
Syce3B5KM66 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syce3B5KM66 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.75□□□□□ -0.37
Syce3B5KM66 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Syce3B5KM66 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Syce3B5KM66 Gm8343-201ENSMUST00000182705 994 ntBASIC12.75□□□□□ -0.37
Syce3B5KM66 Gm31256-201ENSMUST00000194705 506 ntBASIC12.75□□□□□ -0.37
Syce3B5KM66 Gm37301-201ENSMUST00000195412 568 ntBASIC12.75□□□□□ -0.37
Syce3B5KM66 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC12.75□□□□□ -0.37
Syce3B5KM66 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Syce3B5KM66 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Syce3B5KM66 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.75□□□□□ -0.37
Syce3B5KM66 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC12.75□□□□□ -0.37
Syce3B5KM66 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syce3B5KM66 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syce3B5KM66 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syce3B5KM66 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syce3B5KM66 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syce3B5KM66 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syce3B5KM66 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Syce3B5KM66 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syce3B5KM66 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syce3B5KM66 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syce3B5KM66 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syce3B5KM66 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syce3B5KM66 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Syce3B5KM66 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.75□□□□□ -0.37
Syce3B5KM66 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Syce3B5KM66 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Syce3B5KM66 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Syce3B5KM66 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Syce3B5KM66 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Syce3B5KM66 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Syce3B5KM66 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC12.74□□□□□ -0.37
Syce3B5KM66 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Syce3B5KM66 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Syce3B5KM66 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Syce3B5KM66 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC12.74□□□□□ -0.37
Syce3B5KM66 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Syce3B5KM66 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Syce3B5KM66 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Syce3B5KM66 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Syce3B5KM66 Gm23061-201ENSMUST00000102348 116 ntBASIC12.74□□□□□ -0.37
Syce3B5KM66 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Syce3B5KM66 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Syce3B5KM66 Snord17-201ENSMUST00000104526 238 ntBASIC12.74□□□□□ -0.37
Syce3B5KM66 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Syce3B5KM66 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Syce3B5KM66 Gm26047-201ENSMUST00000157308 113 ntBASIC12.74□□□□□ -0.37
Syce3B5KM66 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Syce3B5KM66 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
Syce3B5KM66 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Syce3B5KM66 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Syce3B5KM66 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Syce3B5KM66 Gm26047-202ENSMUST00000198840 115 ntBASIC12.74□□□□□ -0.37
Syce3B5KM66 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.74□□□□□ -0.37
Syce3B5KM66 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Syce3B5KM66 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Syce3B5KM66 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.74□□□□□ -0.37
Syce3B5KM66 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.74□□□□□ -0.37
Syce3B5KM66 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Syce3B5KM66 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC12.74□□□□□ -0.37
Syce3B5KM66 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Syce3B5KM66 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Syce3B5KM66 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Syce3B5KM66 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Syce3B5KM66 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Syce3B5KM66 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Syce3B5KM66 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC12.74□□□□□ -0.37
Syce3B5KM66 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.74□□□□□ -0.37
Syce3B5KM66 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Syce3B5KM66 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Syce3B5KM66 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Syce3B5KM66 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC12.73□□□□□ -0.37
Syce3B5KM66 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Syce3B5KM66 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.73□□□□□ -0.37
Syce3B5KM66 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Syce3B5KM66 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Syce3B5KM66 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Syce3B5KM66 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Syce3B5KM66 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC12.73□□□□□ -0.37
Syce3B5KM66 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.73□□□□□ -0.37
Syce3B5KM66 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Syce3B5KM66 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Syce3B5KM66 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC12.73□□□□□ -0.37
Syce3B5KM66 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.73□□□□□ -0.37
Syce3B5KM66 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Syce3B5KM66 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Syce3B5KM66 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Syce3B5KM66 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Syce3B5KM66 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Syce3B5KM66 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Syce3B5KM66 Gm28686-201ENSMUST00000187404 609 ntBASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms