Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Sec61a2Q9JLR1 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Gm9062-201ENSMUST00000117712 727 ntBASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Gm6397-201ENSMUST00000161973 1069 ntBASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Gm43378-201ENSMUST00000199336 582 ntBASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Gm44008-201ENSMUST00000204345 412 ntBASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Gm6108-201ENSMUST00000208365 367 ntBASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Ginm1-202ENSMUST00000065124 300 ntBASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Gm7551-201ENSMUST00000089593 1074 ntBASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.14□□□□□ -0.79
Sec61a2Q9JLR1 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Gm13809-201ENSMUST00000117921 597 ntBASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Gm13611-201ENSMUST00000118269 318 ntBASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Gm15566-201ENSMUST00000121130 590 ntBASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Gm29499-201ENSMUST00000189151 486 ntBASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Gm28329-201ENSMUST00000191208 689 ntBASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Gm29171-201ENSMUST00000191397 486 ntBASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Gm6905-201ENSMUST00000205729 511 ntBASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Gm45909-201ENSMUST00000212413 1031 ntBASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC10.13□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms