Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1cQ9ES64 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.85□□□□□ -0.35
Ush1cQ9ES64 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1cQ9ES64 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1cQ9ES64 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Ush1cQ9ES64 Gm27320-201ENSMUST00000184892 109 ntBASIC12.85□□□□□ -0.35
Ush1cQ9ES64 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.85□□□□□ -0.35
Ush1cQ9ES64 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.85□□□□□ -0.35
Ush1cQ9ES64 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1cQ9ES64 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1cQ9ES64 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1cQ9ES64 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1cQ9ES64 Gm43307-201ENSMUST00000199465 2371 ntBASIC12.85□□□□□ -0.35
Ush1cQ9ES64 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1cQ9ES64 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1cQ9ES64 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1cQ9ES64 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1cQ9ES64 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1cQ9ES64 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.85□□□□□ -0.35
Ush1cQ9ES64 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1cQ9ES64 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Gm12463-201ENSMUST00000118271 849 ntBASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.84□□□□□ -0.35
Ush1cQ9ES64 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Gm26083-201ENSMUST00000157904 193 ntBASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Gm20482-202ENSMUST00000174729 825 ntBASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.84□□□□□ -0.35
Ush1cQ9ES64 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1cQ9ES64 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC12.83□□□□□ -0.35
Ush1cQ9ES64 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ush1cQ9ES64 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ush1cQ9ES64 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ush1cQ9ES64 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ush1cQ9ES64 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Ush1cQ9ES64 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.83□□□□□ -0.35
Ush1cQ9ES64 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ush1cQ9ES64 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ush1cQ9ES64 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ush1cQ9ES64 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ush1cQ9ES64 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Ush1cQ9ES64 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ush1cQ9ES64 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ush1cQ9ES64 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ush1cQ9ES64 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Ush1cQ9ES64 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ush1cQ9ES64 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.83□□□□□ -0.36
Ush1cQ9ES64 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ush1cQ9ES64 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ush1cQ9ES64 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ush1cQ9ES64 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.83□□□□□ -0.36
Ush1cQ9ES64 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.83□□□□□ -0.36
Ush1cQ9ES64 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ush1cQ9ES64 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ush1cQ9ES64 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ush1cQ9ES64 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ush1cQ9ES64 Gm42971-201ENSMUST00000199228 2079 ntBASIC12.83□□□□□ -0.36
Ush1cQ9ES64 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ush1cQ9ES64 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ush1cQ9ES64 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.83□□□□□ -0.36
Ush1cQ9ES64 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ush1cQ9ES64 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ush1cQ9ES64 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms