Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Gm22379-201ENSMUST00000157480 131 ntBASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Gm9081-201ENSMUST00000182346 991 ntBASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Gm29288-201ENSMUST00000191582 901 ntBASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Gm37604-201ENSMUST00000191749 1272 ntBASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Gm9116-201ENSMUST00000192400 1018 ntBASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Gm43222-201ENSMUST00000199013 603 ntBASIC13.41□□□□□ -0.26
Ube3bQ9ES34 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Gm9102-201ENSMUST00000219250 465 ntBASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Gm5739-201ENSMUST00000208601 1703 ntBASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Gm6831-202ENSMUST00000213025 1673 ntBASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Mir453-201ENSMUST00000104732 82 ntBASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Snord23-201ENSMUST00000116828 109 ntBASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Gm6322-201ENSMUST00000118789 1004 ntBASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Gm16030-201ENSMUST00000159098 603 ntBASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Gm19013-201ENSMUST00000183895 1222 ntBASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Gm19014-201ENSMUST00000184828 1189 ntBASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Gm38018-201ENSMUST00000195651 540 ntBASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Gm6439-201ENSMUST00000199849 862 ntBASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Gm42655-201ENSMUST00000202782 1134 ntBASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Gm19091-201ENSMUST00000208120 978 ntBASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Gm7082-201ENSMUST00000209880 969 ntBASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Gm7525-201ENSMUST00000219425 454 ntBASIC13.4□□□□□ -0.26
Ube3bQ9ES34 AC173345.3-201ENSMUST00000221245 1093 ntBASIC13.4□□□□□ -0.26
Ube3bQ9ES34 AC129975.1-201ENSMUST00000224816 592 ntBASIC13.4□□□□□ -0.26
Ube3bQ9ES34 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Gm9873-201ENSMUST00000063891 1097 ntBASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Gm5805-201ENSMUST00000072779 456 ntBASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Gm26226-201ENSMUST00000082509 116 ntBASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3bQ9ES34 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3bQ9ES34 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3bQ9ES34 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ube3bQ9ES34 Gm44863-201ENSMUST00000207613 1422 ntBASIC13.39□□□□□ -0.27
Ube3bQ9ES34 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3bQ9ES34 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3bQ9ES34 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3bQ9ES34 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC13.39□□□□□ -0.27
Ube3bQ9ES34 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3bQ9ES34 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3bQ9ES34 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3bQ9ES34 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ube3bQ9ES34 Gm35850-202ENSMUST00000211705 2120 ntBASIC13.39□□□□□ -0.27
Ube3bQ9ES34 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3bQ9ES34 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3bQ9ES34 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3bQ9ES34 Gm14579-201ENSMUST00000117068 283 ntBASIC13.39□□□□□ -0.27
Ube3bQ9ES34 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC13.39□□□□□ -0.27
Ube3bQ9ES34 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3bQ9ES34 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC13.39□□□□□ -0.27
Ube3bQ9ES34 Gm9135-201ENSMUST00000182963 990 ntBASIC13.39□□□□□ -0.27
Ube3bQ9ES34 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3bQ9ES34 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC13.39□□□□□ -0.27
Ube3bQ9ES34 Gm43671-201ENSMUST00000200422 433 ntBASIC13.39□□□□□ -0.27
Ube3bQ9ES34 Gm18514-201ENSMUST00000218980 436 ntBASIC13.39□□□□□ -0.27
Ube3bQ9ES34 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC13.39□□□□□ -0.27
Ube3bQ9ES34 Gm18968-201ENSMUST00000221319 862 ntBASIC13.39□□□□□ -0.27
Ube3bQ9ES34 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3bQ9ES34 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3bQ9ES34 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms