Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Gm14776-201ENSMUST00000121029 887 ntBASIC11.32□□□□□ -0.6
Trim42Q9D2H5 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Mir1982-201ENSMUST00000157368 74 ntBASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Gm27731-201ENSMUST00000185192 107 ntBASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Gm9723-201ENSMUST00000192100 457 ntBASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Gm18062-201ENSMUST00000208020 547 ntBASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Gm18055-201ENSMUST00000208254 547 ntBASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 AC125539.1-202ENSMUST00000226449 670 ntBASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Gm10312-201ENSMUST00000078515 489 ntBASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Ablim1-212ENSMUST00000111558 3123 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Slc14a2-201ENSMUST00000025434 2793 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 AC117656.2-201ENSMUST00000224931 2215 ntBASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Gm15004-201ENSMUST00000119192 630 ntBASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Gm4986-201ENSMUST00000119731 549 ntBASIC11.31□□□□□ -0.6
Trim42Q9D2H5 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.31□□□□□ -0.6
Trim42Q9D2H5 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Gm45784-201ENSMUST00000188360 142 ntBASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Gm43118-201ENSMUST00000199149 775 ntBASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Rps4l-202ENSMUST00000204242 789 ntBASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Gm5950-201ENSMUST00000213337 772 ntBASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Gm38910-201ENSMUST00000204630 2448 ntBASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim42Q9D2H5 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim42Q9D2H5 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trim42Q9D2H5 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Trim42Q9D2H5 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trim42Q9D2H5 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim42Q9D2H5 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim42Q9D2H5 Gm16387-201ENSMUST00000180990 2632 ntBASIC11.3□□□□□ -0.6
Trim42Q9D2H5 Gm42826-201ENSMUST00000197548 2639 ntBASIC11.3□□□□□ -0.6
Trim42Q9D2H5 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim42Q9D2H5 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms