Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Gm4157-201ENSMUST00000211647 679 ntBASIC10.12□□□□□ -0.79
Krt88Q9CPR6 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.12□□□□□ -0.79
Krt88Q9CPR6 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Krt88Q9CPR6 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Krt88Q9CPR6 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Krt88Q9CPR6 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.12□□□□□ -0.79
Krt88Q9CPR6 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Krt88Q9CPR6 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Krt88Q9CPR6 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Krt88Q9CPR6 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Krt88Q9CPR6 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Krt88Q9CPR6 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Krt88Q9CPR6 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Krt88Q9CPR6 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Krt88Q9CPR6 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Krt88Q9CPR6 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Krt88Q9CPR6 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Krt88Q9CPR6 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Krt88Q9CPR6 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Krt88Q9CPR6 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Krt88Q9CPR6 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Krt88Q9CPR6 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Krt88Q9CPR6 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Krt88Q9CPR6 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC10.12□□□□□ -0.79
Krt88Q9CPR6 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Krt88Q9CPR6 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Krt88Q9CPR6 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.12□□□□□ -0.79
Krt88Q9CPR6 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Krt88Q9CPR6 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Krt88Q9CPR6 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Gm22133-201ENSMUST00000102082 109 ntBASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Gm11793-201ENSMUST00000120433 981 ntBASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Gm7150-201ENSMUST00000122032 981 ntBASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Mir1896-201ENSMUST00000122641 81 ntBASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Gm22846-201ENSMUST00000157706 270 ntBASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Gm27046-201ENSMUST00000182160 463 ntBASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Gm8343-201ENSMUST00000182705 994 ntBASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Mir8109-201ENSMUST00000184375 117 ntBASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Gm29396-201ENSMUST00000185659 716 ntBASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Gm33366-201ENSMUST00000195583 3827 ntBASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Rprl1-202ENSMUST00000198476 238 ntBASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Gm9353-201ENSMUST00000200472 604 ntBASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Gm18935-201ENSMUST00000212692 664 ntBASIC10.11□□□□□ -0.79
Krt88Q9CPR6 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Krt88Q9CPR6 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Krt88Q9CPR6 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Krt88Q9CPR6 Gm43482-201ENSMUST00000202797 1861 ntBASIC10.1□□□□□ -0.79
Krt88Q9CPR6 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.1□□□□□ -0.79
Krt88Q9CPR6 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Krt88Q9CPR6 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Krt88Q9CPR6 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Krt88Q9CPR6 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.1□□□□□ -0.79
Krt88Q9CPR6 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 146.1 ms