Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Gm23272-201ENSMUST00000104053 129 ntBASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Gm12218-201ENSMUST00000117666 399 ntBASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Gm13182-201ENSMUST00000122241 312 ntBASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Gm25492-201ENSMUST00000157383 129 ntBASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Mrip-ps-201ENSMUST00000184613 940 ntBASIC12.08□□□□□ -0.48
Tlr3Q99MB1 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Gm29067-201ENSMUST00000190821 470 ntBASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Gm9645-201ENSMUST00000197131 792 ntBASIC12.08□□□□□ -0.48
Tlr3Q99MB1 AC153961.1-201ENSMUST00000217760 385 ntBASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Gm23105-201ENSMUST00000083719 134 ntBASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Gm44153-201ENSMUST00000204162 1580 ntBASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Tlr3Q99MB1 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tlr3Q99MB1 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Snord17-201ENSMUST00000104526 238 ntBASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Gm11675-201ENSMUST00000121873 832 ntBASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Gm42518-201ENSMUST00000196277 938 ntBASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Gm33366-201ENSMUST00000195583 3827 ntBASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tlr3Q99MB1 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.06□□□□□ -0.48
Tlr3Q99MB1 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tlr3Q99MB1 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tlr3Q99MB1 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Tlr3Q99MB1 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tlr3Q99MB1 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Tlr3Q99MB1 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.06□□□□□ -0.48
Tlr3Q99MB1 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tlr3Q99MB1 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.06□□□□□ -0.48
Tlr3Q99MB1 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tlr3Q99MB1 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms