Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Gm23769-201ENSMUST00000104441 121 ntBASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Gm15625-201ENSMUST00000117617 1093 ntBASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Gm13284-201ENSMUST00000121020 547 ntBASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Gm5395-201ENSMUST00000121650 915 ntBASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Gm11960-201ENSMUST00000122068 925 ntBASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Gm3329-201ENSMUST00000159873 556 ntBASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Gm26119-201ENSMUST00000175601 104 ntBASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Gm42751-201ENSMUST00000198065 559 ntBASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 AC121357.1-201ENSMUST00000227365 608 ntBASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 AC122035.1-201ENSMUST00000227576 1016 ntBASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Gm15519-201ENSMUST00000120088 1566 ntBASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx6-1Q99MA9 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Gm9133-201ENSMUST00000118289 540 ntBASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Gm15374-201ENSMUST00000119313 844 ntBASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Gm13827-201ENSMUST00000148801 372 ntBASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Gm25343-201ENSMUST00000157460 107 ntBASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Gm6612-201ENSMUST00000170777 395 ntBASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Gm7627-201ENSMUST00000183205 999 ntBASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Gm29067-201ENSMUST00000190821 470 ntBASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Gm7904-201ENSMUST00000217049 465 ntBASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Id2-203ENSMUST00000222667 958 ntBASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Gm25580-201ENSMUST00000083409 327 ntBASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Gm42432-201ENSMUST00000197902 1617 ntBASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx6-1Q99MA9 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms