Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Lims1Q99JW4 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Lims1Q99JW4 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Lims1Q99JW4 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Lims1Q99JW4 Gm3150-201ENSMUST00000166418 204 ntBASIC10.25□□□□□ -0.77
Lims1Q99JW4 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Lims1Q99JW4 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.25□□□□□ -0.77
Lims1Q99JW4 Gm43058-201ENSMUST00000197645 625 ntBASIC10.25□□□□□ -0.77
Lims1Q99JW4 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.25□□□□□ -0.77
Lims1Q99JW4 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC10.25□□□□□ -0.77
Lims1Q99JW4 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lims1Q99JW4 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Lims1Q99JW4 Gm10288-201ENSMUST00000084614 537 ntBASIC10.25□□□□□ -0.77
Lims1Q99JW4 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Lims1Q99JW4 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lims1Q99JW4 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lims1Q99JW4 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lims1Q99JW4 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Lims1Q99JW4 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.25□□□□□ -0.77
Lims1Q99JW4 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lims1Q99JW4 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lims1Q99JW4 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lims1Q99JW4 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lims1Q99JW4 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lims1Q99JW4 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lims1Q99JW4 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Lims1Q99JW4 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Lims1Q99JW4 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lims1Q99JW4 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lims1Q99JW4 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.24□□□□□ -0.77
Lims1Q99JW4 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Gm23061-201ENSMUST00000102348 116 ntBASIC10.24□□□□□ -0.77
Lims1Q99JW4 Gm14592-201ENSMUST00000117201 560 ntBASIC10.24□□□□□ -0.77
Lims1Q99JW4 Gm12218-201ENSMUST00000117666 399 ntBASIC10.24□□□□□ -0.77
Lims1Q99JW4 Gm14263-201ENSMUST00000117955 746 ntBASIC10.24□□□□□ -0.77
Lims1Q99JW4 Gm13461-201ENSMUST00000120980 662 ntBASIC10.24□□□□□ -0.77
Lims1Q99JW4 Gm42997-202ENSMUST00000200321 985 ntBASIC10.24□□□□□ -0.77
Lims1Q99JW4 Gm7504-201ENSMUST00000201449 424 ntBASIC10.24□□□□□ -0.77
Lims1Q99JW4 Gm5996-201ENSMUST00000211110 718 ntBASIC10.24□□□□□ -0.77
Lims1Q99JW4 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.24□□□□□ -0.77
Lims1Q99JW4 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Gm45165-201ENSMUST00000207763 1631 ntBASIC10.24□□□□□ -0.77
Lims1Q99JW4 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.24□□□□□ -0.77
Lims1Q99JW4 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lims1Q99JW4 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.24□□□□□ -0.77
Lims1Q99JW4 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.24□□□□□ -0.77
Lims1Q99JW4 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lims1Q99JW4 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Lims1Q99JW4 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lims1Q99JW4 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lims1Q99JW4 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC10.23□□□□□ -0.77
Lims1Q99JW4 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lims1Q99JW4 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.23□□□□□ -0.77
Lims1Q99JW4 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.23□□□□□ -0.77
Lims1Q99JW4 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lims1Q99JW4 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lims1Q99JW4 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Lims1Q99JW4 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Lims1Q99JW4 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lims1Q99JW4 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.23□□□□□ -0.77
Lims1Q99JW4 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Lims1Q99JW4 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lims1Q99JW4 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lims1Q99JW4 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Lims1Q99JW4 Gm8731-201ENSMUST00000118088 412 ntBASIC10.23□□□□□ -0.77
Lims1Q99JW4 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC10.23□□□□□ -0.77
Lims1Q99JW4 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.23□□□□□ -0.77
Lims1Q99JW4 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms