Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 Gm9625-201ENSMUST00000180422 955 ntBASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 Gm37782-201ENSMUST00000194879 678 ntBASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 Gm45094-201ENSMUST00000207013 617 ntBASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 AC134601.2-201ENSMUST00000221071 130 ntBASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 AC159196.1-201ENSMUST00000225524 377 ntBASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 CT025618.1-203ENSMUST00000227008 589 ntBASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 Gm6478-201ENSMUST00000099450 742 ntBASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smarcd2Q99JR8 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Rgr-203ENSMUST00000225070 4704 ntBASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Gm1826-201ENSMUST00000118646 1162 ntBASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Mir8091-201ENSMUST00000183602 139 ntBASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Gm37452-201ENSMUST00000194416 1160 ntBASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Gm5340-201ENSMUST00000203733 880 ntBASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Gm2448-201ENSMUST00000207080 559 ntBASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 AC164556.1-201ENSMUST00000221318 751 ntBASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smarcd2Q99JR8 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Gm15519-201ENSMUST00000120088 1566 ntBASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd2Q99JR8 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms