Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Pcdhb18Q91Y02 Gm6390-201ENSMUST00000215034 589 ntBASIC11.79□□□□□ -0.52
Pcdhb18Q91Y02 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Pcdhb18Q91Y02 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Pcdhb18Q91Y02 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb18Q91Y02 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Pcdhb18Q91Y02 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb18Q91Y02 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb18Q91Y02 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb18Q91Y02 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb18Q91Y02 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb18Q91Y02 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb18Q91Y02 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb18Q91Y02 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb18Q91Y02 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb18Q91Y02 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb18Q91Y02 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb18Q91Y02 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb18Q91Y02 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdhb18Q91Y02 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.79□□□□□ -0.52
Pcdhb18Q91Y02 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdhb18Q91Y02 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb18Q91Y02 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb18Q91Y02 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdhb18Q91Y02 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb18Q91Y02 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb18Q91Y02 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Gm15528-201ENSMUST00000117821 864 ntBASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Gm12179-201ENSMUST00000118344 1272 ntBASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Gm14993-201ENSMUST00000121180 164 ntBASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Gm17192-201ENSMUST00000169031 511 ntBASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Gm26989-201ENSMUST00000182608 749 ntBASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Gm43778-201ENSMUST00000199438 199 ntBASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Gm3433-201ENSMUST00000210149 1058 ntBASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdhb18Q91Y02 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhb18Q91Y02 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.77□□□□□ -0.52
Pcdhb18Q91Y02 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhb18Q91Y02 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Pcdhb18Q91Y02 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhb18Q91Y02 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.77□□□□□ -0.52
Pcdhb18Q91Y02 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.77□□□□□ -0.52
Pcdhb18Q91Y02 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Pcdhb18Q91Y02 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhb18Q91Y02 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhb18Q91Y02 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb18Q91Y02 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb18Q91Y02 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb18Q91Y02 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Pcdhb18Q91Y02 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Pcdhb18Q91Y02 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb18Q91Y02 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb18Q91Y02 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.77□□□□□ -0.53
Pcdhb18Q91Y02 Mir1905-201ENSMUST00000122779 82 ntBASIC11.77□□□□□ -0.53
Pcdhb18Q91Y02 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.77□□□□□ -0.53
Pcdhb18Q91Y02 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms