Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
StrcQ8VIM6 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
StrcQ8VIM6 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC13.02□□□□□ -0.32
StrcQ8VIM6 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
StrcQ8VIM6 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
StrcQ8VIM6 Mrps33-202ENSMUST00000114797 500 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
StrcQ8VIM6 Gm8809-201ENSMUST00000119367 743 ntBASIC13.02□□□□□ -0.32
StrcQ8VIM6 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.32
StrcQ8VIM6 D430040D24Rik-201ENSMUST00000149224 910 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
StrcQ8VIM6 Gm1758-201ENSMUST00000164528 606 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
StrcQ8VIM6 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
StrcQ8VIM6 Gm18182-201ENSMUST00000191380 1251 ntBASIC13.02□□□□□ -0.32
StrcQ8VIM6 Gm5194-201ENSMUST00000221457 742 ntBASIC13.02□□□□□ -0.32
StrcQ8VIM6 AC161581.1-201ENSMUST00000228696 318 ntBASIC13.02□□□□□ -0.32
StrcQ8VIM6 Fxyd1-201ENSMUST00000039909 620 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
StrcQ8VIM6 Myl10-201ENSMUST00000005611 688 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
StrcQ8VIM6 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
StrcQ8VIM6 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
StrcQ8VIM6 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
StrcQ8VIM6 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
StrcQ8VIM6 Gm28453-201ENSMUST00000185556 1323 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
StrcQ8VIM6 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
StrcQ8VIM6 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
StrcQ8VIM6 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
StrcQ8VIM6 Gm45110-201ENSMUST00000205704 1402 ntBASIC13.02□□□□□ -0.33
StrcQ8VIM6 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.02□□□□□ -0.33
StrcQ8VIM6 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
StrcQ8VIM6 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
StrcQ8VIM6 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
StrcQ8VIM6 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
StrcQ8VIM6 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
StrcQ8VIM6 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
StrcQ8VIM6 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.02□□□□□ -0.33
StrcQ8VIM6 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
StrcQ8VIM6 Tex9-214ENSMUST00000184831 1652 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
StrcQ8VIM6 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
StrcQ8VIM6 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
StrcQ8VIM6 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
StrcQ8VIM6 Dcstamp-201ENSMUST00000022913 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
StrcQ8VIM6 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
StrcQ8VIM6 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
StrcQ8VIM6 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
StrcQ8VIM6 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
StrcQ8VIM6 Gm16439-201ENSMUST00000100687 564 ntBASIC13.02□□□□□ -0.33
StrcQ8VIM6 Gm23129-201ENSMUST00000104259 132 ntBASIC13.02□□□□□ -0.33
StrcQ8VIM6 Rpain-202ENSMUST00000108529 282 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
StrcQ8VIM6 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
StrcQ8VIM6 Gm11929-201ENSMUST00000118175 945 ntBASIC13.02□□□□□ -0.33
StrcQ8VIM6 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC13.02□□□□□ -0.33
StrcQ8VIM6 Gm15702-201ENSMUST00000119680 444 ntBASIC13.02□□□□□ -0.33
StrcQ8VIM6 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC13.02□□□□□ -0.33
StrcQ8VIM6 Ighv1-8-201ENSMUST00000192236 293 ntBASIC13.02□□□□□ -0.33
StrcQ8VIM6 Gm5543-201ENSMUST00000193329 1091 ntBASIC13.02□□□□□ -0.33
StrcQ8VIM6 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
StrcQ8VIM6 Gm32098-201ENSMUST00000211305 479 ntTSL 5 BASIC13.02□□□□□ -0.33
StrcQ8VIM6 AC124772.3-201ENSMUST00000222535 575 ntBASIC13.02□□□□□ -0.33
StrcQ8VIM6 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
StrcQ8VIM6 Cxcl3-201ENSMUST00000031326 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
StrcQ8VIM6 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
StrcQ8VIM6 Iqcf5-201ENSMUST00000085113 551 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
StrcQ8VIM6 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC13.02□□□□□ -0.33
StrcQ8VIM6 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC13.01□□□□□ -0.33
StrcQ8VIM6 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
StrcQ8VIM6 Cd14-201ENSMUST00000061829 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
StrcQ8VIM6 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
StrcQ8VIM6 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
StrcQ8VIM6 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
StrcQ8VIM6 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
StrcQ8VIM6 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
StrcQ8VIM6 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
StrcQ8VIM6 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
StrcQ8VIM6 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
StrcQ8VIM6 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
StrcQ8VIM6 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
StrcQ8VIM6 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
StrcQ8VIM6 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
StrcQ8VIM6 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.01□□□□□ -0.33
StrcQ8VIM6 Gm15661-201ENSMUST00000117390 556 ntBASIC13.01□□□□□ -0.33
StrcQ8VIM6 Gm13201-201ENSMUST00000144031 600 ntTSL 3 BASIC13.01□□□□□ -0.33
StrcQ8VIM6 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
StrcQ8VIM6 Gm13778-202ENSMUST00000146633 537 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
StrcQ8VIM6 Csta1-202ENSMUST00000161638 422 ntTSL 3 BASIC13.01□□□□□ -0.33
StrcQ8VIM6 Gm20467-201ENSMUST00000172872 994 ntTSL 3 BASIC13.01□□□□□ -0.33
StrcQ8VIM6 Gm3052-201ENSMUST00000186409 829 ntBASIC13.01□□□□□ -0.33
StrcQ8VIM6 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
StrcQ8VIM6 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
StrcQ8VIM6 Gm36172-201ENSMUST00000219852 723 ntTSL 3 BASIC13.01□□□□□ -0.33
StrcQ8VIM6 AC163646.3-201ENSMUST00000228879 772 ntBASIC13.01□□□□□ -0.33
StrcQ8VIM6 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
StrcQ8VIM6 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
StrcQ8VIM6 Vwa3b-205ENSMUST00000162449 1360 ntAPPRIS P5 TSL 1 (best) BASIC13.01□□□□□ -0.33
StrcQ8VIM6 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
StrcQ8VIM6 Gm45847-201ENSMUST00000209402 1880 ntTSL 3 BASIC13.01□□□□□ -0.33
StrcQ8VIM6 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
StrcQ8VIM6 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
StrcQ8VIM6 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
StrcQ8VIM6 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
StrcQ8VIM6 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
StrcQ8VIM6 Erich3-203ENSMUST00000189969 3460 ntBASIC13□□□□□ -0.33
StrcQ8VIM6 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms