Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Gm6024-201ENSMUST00000117850 1558 ntBASIC12.12□□□□□ -0.47
TraipQ8VIG6 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Gm37953-201ENSMUST00000195293 1884 ntBASIC12.12□□□□□ -0.47
TraipQ8VIG6 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TraipQ8VIG6 AC118639.1-203ENSMUST00000228425 2016 ntBASIC12.11□□□□□ -0.47
TraipQ8VIG6 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.11□□□□□ -0.47
TraipQ8VIG6 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Gm45210-201ENSMUST00000206401 1577 ntBASIC12.11□□□□□ -0.47
TraipQ8VIG6 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Gm25880-201ENSMUST00000104331 132 ntBASIC12.11□□□□□ -0.47
TraipQ8VIG6 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Gm22877-201ENSMUST00000175451 105 ntBASIC12.11□□□□□ -0.47
TraipQ8VIG6 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Gm4753-201ENSMUST00000188327 1255 ntBASIC12.11□□□□□ -0.47
TraipQ8VIG6 Gm18776-201ENSMUST00000188833 654 ntBASIC12.11□□□□□ -0.47
TraipQ8VIG6 Gm9369-201ENSMUST00000196009 733 ntBASIC12.11□□□□□ -0.47
TraipQ8VIG6 Gm19166-201ENSMUST00000196041 1063 ntBASIC12.11□□□□□ -0.47
TraipQ8VIG6 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC12.11□□□□□ -0.47
TraipQ8VIG6 AC160929.1-201ENSMUST00000221247 415 ntBASIC12.11□□□□□ -0.47
TraipQ8VIG6 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TraipQ8VIG6 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.11□□□□□ -0.47
TraipQ8VIG6 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TraipQ8VIG6 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
TraipQ8VIG6 Gm44178-201ENSMUST00000205229 2930 ntBASIC12.1□□□□□ -0.47
TraipQ8VIG6 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
TraipQ8VIG6 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TraipQ8VIG6 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.1□□□□□ -0.47
TraipQ8VIG6 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TraipQ8VIG6 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TraipQ8VIG6 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TraipQ8VIG6 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TraipQ8VIG6 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TraipQ8VIG6 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TraipQ8VIG6 Sfxn2-201ENSMUST00000026011 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TraipQ8VIG6 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TraipQ8VIG6 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
TraipQ8VIG6 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TraipQ8VIG6 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TraipQ8VIG6 Gm5308-201ENSMUST00000196752 1354 ntBASIC12.1□□□□□ -0.47
TraipQ8VIG6 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
TraipQ8VIG6 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TraipQ8VIG6 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TraipQ8VIG6 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TraipQ8VIG6 Gm16030-201ENSMUST00000159098 603 ntBASIC12.1□□□□□ -0.47
TraipQ8VIG6 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC12.1□□□□□ -0.47
TraipQ8VIG6 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
TraipQ8VIG6 Gm9353-201ENSMUST00000200472 604 ntBASIC12.1□□□□□ -0.47
TraipQ8VIG6 CT030653.1-201ENSMUST00000224382 1279 ntBASIC12.1□□□□□ -0.47
TraipQ8VIG6 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.1□□□□□ -0.47
TraipQ8VIG6 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TraipQ8VIG6 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
TraipQ8VIG6 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TraipQ8VIG6 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
TraipQ8VIG6 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
TraipQ8VIG6 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TraipQ8VIG6 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms